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The map label for this gene is yopR

Identifier: 255767466

GI number: 255767466

Start: 2204192

End: 2205169

Strand: Reverse

Name: yopR

Synonym: BSU20790

Alternate gene names: 255767466

Gene position: 2205169-2204192 (Counterclockwise)

Preceding gene: 16079139

Following gene: 16079136

Centisome position: 52.31

GC content: 30.88

Gene sequence:

>978_bases
ATGTTCAATAGTGAGATTAAGGAAAAATATTTAGATACCTTATCTGAGGGTATGGTTATGCAGATGAGGCCTATTTTTGC
AAAAGCAGAGATTACTGAGACTTTATATAATAAAGACATTTATGATTTCACATCAATGCAAATTTTAGAACTTATACGAT
CATTCGATCAAACCACTATCGGTAGTGTTCGAAGAACCTTAGCATTATTGTCATTGTATATTGATTGGGCAATTTCATAT
AAGTTAAGTAAAGGATTAACCAATTTAGCAAGAACTATTTCTGAAGAAGAGCTTTATGAATGTCTCGGGGACAAAAAATT
ATATATTACTTATAGTGAATTAGAGGAAATGGAAAATCAATTAGTTAATTATCAATCTAAGGCTGTGTTAAGACTACTTT
TTGAAGGAGTTTCTGGTTTAGCTCATTCTGAATTGCTAAGTTTAACGAAGAAGCAAGTTGAGGATGCAATGCTTAACGGT
AACGTTTTAACCCTCTATGATTCAAAGCACGGTGAACGAAAACTAAAAGTTAGTAGTGAATGTCTTGTTATTGCCTTAAA
TGCAGCTCAGGAAACTAAATATAAATTAAAGAATGGGAAGGCAAAAGGCCAAACAAAAGAAGTCTTTTTAGTTGAAAATG
ATTATGTAGTTAAAACAAAAAGAACGTCCAACAAAGGAGACGGCCAAGCAAGTAAATTTGTCATAACTAATCTAATTACT
GATATATCTGAGTTCTTTAAAATTAACTTTTTAACACCAAATACTATTGTTAGATCTGGTCATTTGTATAGAGCATATCA
GCTTTATAAAGAAAAAGGGGTTATTGATAACTCTGTAAGGTATCAGATTATAGATGACTTTAATTTAAGGGTAAAATCCA
AATATCGAGCAGTTTATTCAATGCAAGATTATATTAATGAGGAAGAAGTTAATAAATATTACGCAGAAGAACTAGGTCTA
AAAGAGACGACCATTTAA

Upstream 100 bases:

>100_bases
TAGTAGACAAGAATGGAAATGCTAAATCACCACAAAAGATATGGAATTTCTTCAATAATTTAAAAATAGACGAGTAATTA
CTTAGGAGTTGTTTGTTGCA

Downstream 100 bases:

>100_bases
ATATGAAATCCATTTGACTATTTTGGTTAAATGGATTTTTCTTTTATCTCAAAAAATTGTGAAAAAATTCGCATTTCGAC
AAAAATAGACAAAATAATCA

Product: integrase; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFNSEIKEKYLDTLSEGMVMQMRPIFAKAEITETLYNKDIYDFTSMQILELIRSFDQTTIGSVRRTLALLSLYIDWAISY
KLSKGLTNLARTISEEELYECLGDKKLYITYSELEEMENQLVNYQSKAVLRLLFEGVSGLAHSELLSLTKKQVEDAMLNG
NVLTLYDSKHGERKLKVSSECLVIALNAAQETKYKLKNGKAKGQTKEVFLVENDYVVKTKRTSNKGDGQASKFVITNLIT
DISEFFKINFLTPNTIVRSGHLYRAYQLYKEKGVIDNSVRYQIIDDFNLRVKSKYRAVYSMQDYINEEEVNKYYAEELGL
KETTI

Sequences:

>Translated_325_residues
MFNSEIKEKYLDTLSEGMVMQMRPIFAKAEITETLYNKDIYDFTSMQILELIRSFDQTTIGSVRRTLALLSLYIDWAISY
KLSKGLTNLARTISEEELYECLGDKKLYITYSELEEMENQLVNYQSKAVLRLLFEGVSGLAHSELLSLTKKQVEDAMLNG
NVLTLYDSKHGERKLKVSSECLVIALNAAQETKYKLKNGKAKGQTKEVFLVENDYVVKTKRTSNKGDGQASKFVITNLIT
DISEFFKINFLTPNTIVRSGHLYRAYQLYKEKGVIDNSVRYQIIDDFNLRVKSKYRAVYSMQDYINEEEVNKYYAEELGL
KETTI
>Mature_325_residues
MFNSEIKEKYLDTLSEGMVMQMRPIFAKAEITETLYNKDIYDFTSMQILELIRSFDQTTIGSVRRTLALLSLYIDWAISY
KLSKGLTNLARTISEEELYECLGDKKLYITYSELEEMENQLVNYQSKAVLRLLFEGVSGLAHSELLSLTKKQVEDAMLNG
NVLTLYDSKHGERKLKVSSECLVIALNAAQETKYKLKNGKAKGQTKEVFLVENDYVVKTKRTSNKGDGQASKFVITNLIT
DISEFFKINFLTPNTIVRSGHLYRAYQLYKEKGVIDNSVRYQIIDDFNLRVKSKYRAVYSMQDYINEEEVNKYYAEELGL
KETTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPR_BACSU (O34558)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389961.2
- EnsemblBacteria:   EBBACT00000000171
- GeneID:   936483
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20790
- GenoList:   BSU20790
- ProtClustDB:   CLSK254613
- BioCyc:   BSUB:BSU20790-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37499; Mature: 37499

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSEIKEKYLDTLSEGMVMQMRPIFAKAEITETLYNKDIYDFTSMQILELIRSFDQTTI
CCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHH
GSVRRTLALLSLYIDWAISYKLSKGLTNLARTISEEELYECLGDKKLYITYSELEEMENQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHHHH
LVNYQSKAVLRLLFEGVSGLAHSELLSLTKKQVEDAMLNGNVLTLYDSKHGERKLKVSSE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCC
CLVIALNAAQETKYKLKNGKAKGQTKEVFLVENDYVVKTKRTSNKGDGQASKFVITNLIT
EEEEEEECCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHH
DISEFFKINFLTPNTIVRSGHLYRAYQLYKEKGVIDNSVRYQIIDDFNLRVKSKYRAVYS
HHHHHHEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHHHHH
MQDYINEEEVNKYYAEELGLKETTI
HHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFNSEIKEKYLDTLSEGMVMQMRPIFAKAEITETLYNKDIYDFTSMQILELIRSFDQTTI
CCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHH
GSVRRTLALLSLYIDWAISYKLSKGLTNLARTISEEELYECLGDKKLYITYSELEEMENQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHHHH
LVNYQSKAVLRLLFEGVSGLAHSELLSLTKKQVEDAMLNGNVLTLYDSKHGERKLKVSSE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCC
CLVIALNAAQETKYKLKNGKAKGQTKEVFLVENDYVVKTKRTSNKGDGQASKFVITNLIT
EEEEEEECCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHH
DISEFFKINFLTPNTIVRSGHLYRAYQLYKEKGVIDNSVRYQIIDDFNLRVKSKYRAVYS
HHHHHHEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEHHHHHHHHH
MQDYINEEEVNKYYAEELGLKETTI
HHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377