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The map label for this gene is ymcC

Identifier: 16078769

GI number: 16078769

Start: 1781228

End: 1781785

Strand: Reverse

Name: ymcC

Synonym: BSU17070

Alternate gene names: 16078769

Gene position: 1781785-1781228 (Counterclockwise)

Preceding gene: 255767401

Following gene: 50812231

Centisome position: 42.27

GC content: 44.27

Gene sequence:

>558_bases
TTGAACGGTATCGCATGGATGATTGTTTTCTGTGAAATTGCGTTTTGGGTTGTCATTGTTTTGGGGCTTGCTGTACGCTA
CGTATTCAAACGACATACATTAGGACTGCTATTCCTTGCCTTAACTCCAGTTATCGATTTGATCTTGTTAGCGGCAACTG
GTGTGGACCTTTACCGCGGAGCCTCAGCGACCGCAGCCCATGGGATTGCAGCTGTTTACATCGGTATATCGATCGCTTAT
GGGAAACAAATGATTCAATGGGCAGATGAAAAGTTTCAATATTATGTGACAAAAAAAGGAACAAAACCGCTGAAACGTTT
TGGAATGGACCATGCCAAGCACGGTGCGAAAGGCTGGCTAAGACATGTGCTGGCCTACTTAATTGGTGCGGGACTATTGG
CAGGGATGATCTATTTTATCAATGACTCTTCCCGAACCGAGGCGTTGAGCGGCATTCTTAAACTGTGGACTGTCATTATA
GGCATTGACTTTCTCATTACAGCCAGCTATTTTATTTGGCCAAAAAAAGAGAAAGCTTCGGCGAATCTCAGGAGTTAA

Upstream 100 bases:

>100_bases
AAAATGAGAGGGCAATTTTTATAATACAGTTGTGTTACAAAAACAAAGATGGTAACATATTATTTAAATAATACAACTGT
ATTGAAAAGAGGGGAATGGA

Downstream 100 bases:

>100_bases
CATGATGAAAAAGGCCCTTCCCCAGTGGAAAGGGCCTTTTTTGGTTTTGTTAAAATATGCTATACTATTTTCGTCAGAAA
ACAGACTTATAGATATTTTG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRGASATAAHGIAAVYIGISIAY
GKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVII
GIDFLITASYFIWPKKEKASANLRS

Sequences:

>Translated_185_residues
MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRGASATAAHGIAAVYIGISIAY
GKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVII
GIDFLITASYFIWPKKEKASANLRS
>Mature_185_residues
MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRGASATAAHGIAAVYIGISIAY
GKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVII
GIDFLITASYFIWPKKEKASANLRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMCC_BACSU (O31780)

Other databases:

- EMBL:   AL009126
- PIR:   E69884
- RefSeq:   NP_389588.1
- EnsemblBacteria:   EBBACT00000000854
- GeneID:   939511
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17070
- NMPDR:   fig|224308.1.peg.1709
- GenoList:   BSU17070
- GeneTree:   EBGT00050000002744
- HOGENOM:   HBG337457
- OMA:   ACEVAFW
- ProtClustDB:   CLSK887320
- BioCyc:   BSUB:BSU17070-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20512; Mature: 20512

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc9908cc)-; HASH(0xf4ec14c)-; HASH(0xf3e844c)-; HASH(0xc8213a0)-; HASH(0xe2c13c8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
ASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHCCCHHHHH
RHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVIIGIDFLITASYFIWPKKEKAS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ANLRS
CCCCH
>Mature Secondary Structure
MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLALTPVIDLILLAATGVDLYRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
ASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKGTKPLKRFGMDHAKHGAKGWL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHCCCHHHHH
RHVLAYLIGAGLLAGMIYFINDSSRTEALSGILKLWTVIIGIDFLITASYFIWPKKEKAS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ANLRS
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377