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The map label for this gene is yjqB

Identifier: 16078313

GI number: 16078313

Start: 1319011

End: 1319613

Strand: Direct

Name: yjqB

Synonym: BSU12480

Alternate gene names: 16078313

Gene position: 1319011-1319613 (Clockwise)

Preceding gene: 16078311

Following gene: 255767280

Centisome position: 31.29

GC content: 47.1

Gene sequence:

>603_bases
ATGGAAGATATGTATGACAGCTTTGCGGCCCTTTCTGCTTCTGAGTCGGAGTACCGGATTATTTATGAGGAGAAAAACGG
AAGTGAGCTTATCGTCCTCGGTCCTCACGGCGGCAGAATTGAGCCTGGCGTCAGTGAACTGGTGCGGGCATTTTCGGATC
GATGTTCCATCTATTTGTTTGAGGGTCTAAAGCAGCGAAACAACCGTTCCTTGCATCTCACTAGCATTCGTTTTGATGAG
CCGCTGGCTTTAGAAAAAGTGAATGACCACCATTACGCATTAGCGTTTCACGGGTATTATGATCCGAAAATCCCGCATAC
ATTGGTCGGCGGGGCGGATCGTAAAAAAGCCAAGCTCATTTGTGAGCGTCTGAATGAAGCGGGTTTTAGCGCCGAGCTCA
CTAATGAGAAAGACCGCCTGGCAGGTGTACACCCAAACAATATTGTCAATCGGACGAAAAGAGAAATGGGACTGCAATTG
GAGGTAAGCACGGCACAGCGAAATGCGCTATTCCGCAATTTTGGGTGCCGTGATAAAAGCTACATACAAAACGATTTGTT
TGATCGATATGTGGAAGCCGTCAAGCTTGGCTTTTATACATAA

Upstream 100 bases:

>100_bases
ACCTCCTCTGCGTATTCTATCAAATCATACTATAAAAAAGGTTTTCATTCATAGATGAGTAGAGTAAACTGGTGCTGACT
GGTAAAGGGGGGCGTTCAAG

Downstream 100 bases:

>100_bases
AACTAGACGGGACCTGCACGGTTGGCCTATTCCTTCATACGCTGGGGTTGTGCGAAAGTGTGGGGAGGAATGATTCATGT
TTTATCATATAAAAGAGCTT

Product: PBSX phage-related replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEDMYDSFAALSASESEYRIIYEEKNGSELIVLGPHGGRIEPGVSELVRAFSDRCSIYLFEGLKQRNNRSLHLTSIRFDE
PLALEKVNDHHYALAFHGYYDPKIPHTLVGGADRKKAKLICERLNEAGFSAELTNEKDRLAGVHPNNIVNRTKREMGLQL
EVSTAQRNALFRNFGCRDKSYIQNDLFDRYVEAVKLGFYT

Sequences:

>Translated_200_residues
MEDMYDSFAALSASESEYRIIYEEKNGSELIVLGPHGGRIEPGVSELVRAFSDRCSIYLFEGLKQRNNRSLHLTSIRFDE
PLALEKVNDHHYALAFHGYYDPKIPHTLVGGADRKKAKLICERLNEAGFSAELTNEKDRLAGVHPNNIVNRTKREMGLQL
EVSTAQRNALFRNFGCRDKSYIQNDLFDRYVEAVKLGFYT
>Mature_200_residues
MEDMYDSFAALSASESEYRIIYEEKNGSELIVLGPHGGRIEPGVSELVRAFSDRCSIYLFEGLKQRNNRSLHLTSIRFDE
PLALEKVNDHHYALAFHGYYDPKIPHTLVGGADRKKAKLICERLNEAGFSAELTNEKDRLAGVHPNNIVNRTKREMGLQL
EVSTAQRNALFRNFGCRDKSYIQNDLFDRYVEAVKLGFYT

Specific function: Unknown

COG id: COG4195

COG function: function code R; Phage-related replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0714 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJQB_BACSU (O34785)

Other databases:

- EMBL:   AF034138
- EMBL:   AL009126
- PIR:   B69854
- RefSeq:   NP_389130.1
- EnsemblBacteria:   EBBACT00000001356
- GeneID:   939423
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12480
- NMPDR:   fig|224308.1.peg.1249
- GenoList:   BSU12480
- GeneTree:   EBGT00050000001427
- HOGENOM:   HBG668948
- OMA:   LICERLN
- ProtClustDB:   CLSK887116
- BioCyc:   BSUB:BSU12480-MONOMER
- InterPro:   IPR008585

Pfam domain/function: PF05908 DUF867

EC number: NA

Molecular weight: Translated: 22851; Mature: 22851

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDMYDSFAALSASESEYRIIYEEKNGSELIVLGPHGGRIEPGVSELVRAFSDRCSIYLF
CCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEE
EGLKQRNNRSLHLTSIRFDEPLALEKVNDHHYALAFHGYYDPKIPHTLVGGADRKKAKLI
HHHHHCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHH
CERLNEAGFSAELTNEKDRLAGVHPNNIVNRTKREMGLQLEVSTAQRNALFRNFGCRDKS
HHHHHHCCCCEECCCCHHHCCCCCCHHHHHHHHHHHCCEEEECHHHHHHHHHHCCCCCHH
YIQNDLFDRYVEAVKLGFYT
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEDMYDSFAALSASESEYRIIYEEKNGSELIVLGPHGGRIEPGVSELVRAFSDRCSIYLF
CCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEE
EGLKQRNNRSLHLTSIRFDEPLALEKVNDHHYALAFHGYYDPKIPHTLVGGADRKKAKLI
HHHHHCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHH
CERLNEAGFSAELTNEKDRLAGVHPNNIVNRTKREMGLQLEVSTAQRNALFRNFGCRDKS
HHHHHHCCCCEECCCCHHHCCCCCCHHHHHHHHHHHCCEEEECHHHHHHHHHHCCCCCHH
YIQNDLFDRYVEAVKLGFYT
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377