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The map label for this gene is yjqC

Identifier: 255767280

GI number: 255767280

Start: 1319690

End: 1320526

Strand: Direct

Name: yjqC

Synonym: BSU12490

Alternate gene names: 255767280

Gene position: 1319690-1320526 (Clockwise)

Preceding gene: 16078313

Following gene: 255767282

Centisome position: 31.3

GC content: 48.75

Gene sequence:

>837_bases
ATGTTTTATCATATAAAAGAGCTTCAATATCAAGCAAAGCCAGCTCATCCCGATCCGGTTTATGCGAAAAAACTTCAAGA
GGTGCTCGGCGGCCAATTCGGTGAAATTAGCGTCATGATGCAGTATTTGTTTCAAGGGTTTAACTGCAGGGCGGATGCTA
AGTATAAAGATTTGTTATATGATGTGGGGACCGAAGAGATTGGGCACGTAGAAATGCTGGCAACGATGATTTCCAGGCTT
CTGGACAATGCACCCGCGGATGTACAGGAGGATGCTTATAAAAGCAATCCCGCTATTGCAGCAGTCATGTCAGGGATGAA
CCCTCAGCACGCGATTGTGTCCGGATTGGGGGCGATGGCATCAGATAGTGAGGGCTATCCGTGGAATGCAAAATACATTA
TCTCAAGCGGAAACCTGCTGGCCGATTTTCGCGCTAACTTAAATGCGGAGGCCCAAGGACGCCTTCAGGTGACACGGCTT
TATGCCATGACCGATGATCCAGGGGTAAGAGATATGCTGTCATTTTTGATTGCAAGGGATACCTATCATCAAAATATGTG
GTACGCGGCCATTAAAGAGCTGGAGGAAAGAGAACGGGATATTGTCGTCCCGACGACGTTTCCGCGTGAGCTCGAAAAGC
AGGAAGTCTCCTATGACCTGTTTAACTTTTCCAGGGGAGATGAAAGCTCACAAGGAAGATGGGCACATGGGGAAGCCTTT
GACGGCCGGGGTGAATTCAGGTATATCCCGGCTCCGATTGCGTTCGCATCTGCGCCTCATCTTAAACCGGCGCCCATGTG
GCTGCATAATACAGTTCCCCCAATGTCGAAATGTTAG

Upstream 100 bases:

>100_bases
GTCAAGCTTGGCTTTTATACATAAAACTAGACGGGACCTGCACGGTTGGCCTATTCCTTCATACGCTGGGGTTGTGCGAA
AGTGTGGGGAGGAATGATTC

Downstream 100 bases:

>100_bases
GTTCTCTTCTGGGCTGAGGAATATATCCTCAGCCCGTATTTGATCAGATGTTTTTACCAATATGATATAACGCTTTTTCC
TCAGCGACCTGCAAGTGCTG

Product: PBSX phage manganese-containing catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCRADAKYKDLLYDVGTEEIGHVEMLATMISRL
LDNAPADVQEDAYKSNPAIAAVMSGMNPQHAIVSGLGAMASDSEGYPWNAKYIISSGNLLADFRANLNAEAQGRLQVTRL
YAMTDDPGVRDMLSFLIARDTYHQNMWYAAIKELEERERDIVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAF
DGRGEFRYIPAPIAFASAPHLKPAPMWLHNTVPPMSKC

Sequences:

>Translated_278_residues
MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCRADAKYKDLLYDVGTEEIGHVEMLATMISRL
LDNAPADVQEDAYKSNPAIAAVMSGMNPQHAIVSGLGAMASDSEGYPWNAKYIISSGNLLADFRANLNAEAQGRLQVTRL
YAMTDDPGVRDMLSFLIARDTYHQNMWYAAIKELEERERDIVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAF
DGRGEFRYIPAPIAFASAPHLKPAPMWLHNTVPPMSKC
>Mature_278_residues
MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCRADAKYKDLLYDVGTEEIGHVEMLATMISRL
LDNAPADVQEDAYKSNPAIAAVMSGMNPQHAIVSGLGAMASDSEGYPWNAKYIISSGNLLADFRANLNAEAQGRLQVTRL
YAMTDDPGVRDMLSFLIARDTYHQNMWYAAIKELEERERDIVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAF
DGRGEFRYIPAPIAFASAPHLKPAPMWLHNTVPPMSKC

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJQC_BACSU (O34423)

Other databases:

- EMBL:   AF034138
- EMBL:   AL009126
- PIR:   C69854
- RefSeq:   NP_389131.2
- ProteinModelPortal:   O34423
- SMR:   O34423
- EnsemblBacteria:   EBBACT00000002777
- GeneID:   939414
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12490
- NMPDR:   fig|224308.1.peg.1250
- GenoList:   BSU12490
- GeneTree:   EBGT00050000002756
- HOGENOM:   HBG462336
- ProtClustDB:   CLSK2301454
- BioCyc:   BSUB:BSU12490-MONOMER
- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078
- Gene3D:   G3DSA:1.20.1260.10

Pfam domain/function: PF05067 Mn_catalase; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 31310; Mature: 31310

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCRADAKYKDLLY
CCEEHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
DVGTEEIGHVEMLATMISRLLDNAPADVQEDAYKSNPAIAAVMSGMNPQHAIVSGLGAMA
HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHC
SDSEGYPWNAKYIISSGNLLADFRANLNAEAQGRLQVTRLYAMTDDPGVRDMLSFLIARD
CCCCCCCCCCEEEEECCCEEEEHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
TYHQNMWYAAIKELEERERDIVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAF
HHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DGRGEFRYIPAPIAFASAPHLKPAPMWLHNTVPPMSKC
CCCCCEEEECCCHHCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MFYHIKELQYQAKPAHPDPVYAKKLQEVLGGQFGEISVMMQYLFQGFNCRADAKYKDLLY
CCEEHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
DVGTEEIGHVEMLATMISRLLDNAPADVQEDAYKSNPAIAAVMSGMNPQHAIVSGLGAMA
HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHC
SDSEGYPWNAKYIISSGNLLADFRANLNAEAQGRLQVTRLYAMTDDPGVRDMLSFLIARD
CCCCCCCCCCEEEEECCCEEEEHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
TYHQNMWYAAIKELEERERDIVVPTTFPRELEKQEVSYDLFNFSRGDESSQGRWAHGEAF
HHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DGRGEFRYIPAPIAFASAPHLKPAPMWLHNTVPPMSKC
CCCCCEEEECCCHHCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377