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The map label for this gene is yhbE

Identifier: 16077960

GI number: 16077960

Start: 971374

End: 972087

Strand: Direct

Name: yhbE

Synonym: BSU08950

Alternate gene names: 16077960

Gene position: 971374-972087 (Clockwise)

Preceding gene: 16077959

Following gene: 255767209

Centisome position: 23.04

GC content: 46.64

Gene sequence:

>714_bases
ATGGATGTAGTGGAAAAGCTGGTGATAAATGGATCAGGAAGTTCTAAGGGAGGAACATTTCAATCAGTTGAGATTAATGG
CAGCGGGACAGTGGCCGGGGACGTGGAGTGTGACACTTTTTCTTTTAATGGAAACGGAAAAGCGGACGGCAGCGTCAAAG
CGAAAGCGGTAACTATCAGCGGTTCAGGAAAGATACATGGAGACGTTGAAGCAGAATCTATCCGGATGAATGGCACTGGT
TTTATTCAAGGAGAGGTATCTGCAAAACAATTGAAAATCGCTGGATCATCAACATTTGGCGGCACTGTCAAGGCTGATGG
AATTGACATTAGCGGAAAAGCTGTCATGGAAGCAGATTGTGAAACAGAAACCTTTCAATCAGAAGGGAAATGCAAAATCA
GCGGGCTTTTAAATGCAGACCAGGTGATCATTAAGCTTTCTGCAGGGGAAAGCTATGCGCGGGAGATCGGCTGCCGCCAT
CTTCAAGTGACCTGCAGAAAAGGAATGCTGACATTGCTCAGATTGATGCCGCAGCCTGTTCTAACAGCAGAGCTGATCGA
AGGTGACGTGATTGAATTGACAAATACAAAGGCGAAAACCGTGCGCGGTAATAAAGTGATCATCGGCCCGGATTGCCAGA
TTGAAACCGTCGAATACAGCGGGGACTATACCTGTGATCCAAGCGCGTCGGTTGAAACATCCACAAAGTTGTAA

Upstream 100 bases:

>100_bases
ACAGCATTTTGTTTGAATCATCCGTAAAGGTTGTGGAACGGGTAGATTTATTAAAAGCTTCAGAGGAATTAAAAACAACA
TTTATGCAGGAGGGCCATCA

Downstream 100 bases:

>100_bases
GGAGGATCGTAATGGAGACAACAAAACTGGGAAATTTAAAATTATATGGCGCTGGGCATGCCGCAGGAGGCGCGTATCAC
AATGTCAGCATCAAAGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKAKAVTISGSGKIHGDVEAESIRMNGTG
FIQGEVSAKQLKIAGSSTFGGTVKADGIDISGKAVMEADCETETFQSEGKCKISGLLNADQVIIKLSAGESYAREIGCRH
LQVTCRKGMLTLLRLMPQPVLTAELIEGDVIELTNTKAKTVRGNKVIIGPDCQIETVEYSGDYTCDPSASVETSTKL

Sequences:

>Translated_237_residues
MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKAKAVTISGSGKIHGDVEAESIRMNGTG
FIQGEVSAKQLKIAGSSTFGGTVKADGIDISGKAVMEADCETETFQSEGKCKISGLLNADQVIIKLSAGESYAREIGCRH
LQVTCRKGMLTLLRLMPQPVLTAELIEGDVIELTNTKAKTVRGNKVIIGPDCQIETVEYSGDYTCDPSASVETSTKL
>Mature_237_residues
MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKAKAVTISGSGKIHGDVEAESIRMNGTG
FIQGEVSAKQLKIAGSSTFGGTVKADGIDISGKAVMEADCETETFQSEGKCKISGLLNADQVIIKLSAGESYAREIGCRH
LQVTCRKGMLTLLRLMPQPVLTAELIEGDVIELTNTKAKTVRGNKVIIGPDCQIETVEYSGDYTCDPSASVETSTKL

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHBE_BACSU (P39132)

Other databases:

- EMBL:   Z93102
- EMBL:   AL009126
- EMBL:   X79388
- PIR:   H69820
- RefSeq:   NP_388776.1
- ProteinModelPortal:   P39132
- EnsemblBacteria:   EBBACT00000000087
- GeneID:   939252
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08950
- NMPDR:   fig|224308.1.peg.895
- GenoList:   BSU08950
- GeneTree:   EBGT00050000001266
- HOGENOM:   HBG338662
- OMA:   AKTVRGN
- ProtClustDB:   CLSK2518214
- BioCyc:   BSUB:BSU08950-MONOMER
- InterPro:   IPR007607

Pfam domain/function: PF04519 DUF583

EC number: NA

Molecular weight: Translated: 24723; Mature: 24723

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKAKAVTIS
CCCHHEEEEECCCCCCCCEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEEEE
GSGKIHGDVEAESIRMNGTGFIQGEVSAKQLKIAGSSTFGGTVKADGIDISGKAVMEADC
CCCEEECCEEEEEEEECCCEEEEECCCEEEEEEECCCCCCCEEEECCEEECCCEEEECCC
ETETFQSEGKCKISGLLNADQVIIKLSAGESYAREIGCRHLQVTCRKGMLTLLRLMPQPV
CCHHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCEEEEEEHHHHHHHHHHHCCCCC
LTAELIEGDVIELTNTKAKTVRGNKVIIGPDCQIETVEYSGDYTCDPSASVETSTKL
EEHHHHCCCEEEEECCEEEEEECCEEEECCCCEEEEEEECCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MDVVEKLVINGSGSSKGGTFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKAKAVTIS
CCCHHEEEEECCCCCCCCEEEEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEEEEEE
GSGKIHGDVEAESIRMNGTGFIQGEVSAKQLKIAGSSTFGGTVKADGIDISGKAVMEADC
CCCEEECCEEEEEEEECCCEEEEECCCEEEEEEECCCCCCCEEEECCEEECCCEEEECCC
ETETFQSEGKCKISGLLNADQVIIKLSAGESYAREIGCRHLQVTCRKGMLTLLRLMPQPV
CCHHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCEEEEEEHHHHHHHHHHHCCCCC
LTAELIEGDVIELTNTKAKTVRGNKVIIGPDCQIETVEYSGDYTCDPSASVETSTKL
EEHHHHCCCEEEEECCEEEEEECCEEEECCCCEEEEEEECCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377