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The map label for this gene is yhbF

Identifier: 255767209

GI number: 255767209

Start: 972099

End: 972806

Strand: Direct

Name: yhbF

Synonym: BSU08960

Alternate gene names: 255767209

Gene position: 972099-972806 (Clockwise)

Preceding gene: 16077960

Following gene: 16077962

Centisome position: 23.06

GC content: 46.05

Gene sequence:

>708_bases
ATGGAGACAACAAAACTGGGAAATTTAAAATTATATGGCGCTGGGCATGCCGCAGGAGGCGCGTATCACAATGTCAGCAT
CAAAGGAGAAGGTATAGTTGGAGAAGGGCTGTCTGCTGTAGGCTGCCGCATATACGGAACGGGCCTTTTTCTCGGAAAAG
CAGAGACTGAGCGGCTGCGTGTGCTCGGAGAAAGTGAATGTAAAGGCGATCTGACAGCCGGCAAAATCAATATATATGGG
ACAATGAAAGTCAGCGGCTCACTTCAATTTGATCGATTCAATCTGAAAGGCCAGACTGAAATTGGCGGGAATATGACTGG
AGAATCCTGCGATGTGAAAGGGAAGCTTAGCGTAATAGGTGATTGTGAAACAGAAATGTTCCATGTCACAGGCTGTGTTG
ATGTATCGGGGTTATTAAATTCGGGTGAGATCAAGCTGGGATTGAGCCATGATATAAGCCATGTGCAGGAAATCGGCGGA
ACAACAATTACAGTGAAAAGACGCGCGAGTTTTTTTAGCCGGAAGAAAGGGAAGCTGATCGCCGATGTCATAGAAGGAGA
TCGGGTTTATTTGGAGAATACCGAAGCGGCAGTTGTCAGGGGAAAAGAAGTGATCATCGGGCCGGGATGCAGCATCGGAA
CGATTGAGTACGAATACAAATGTGAATGCGATCCGCATTCACAGATTAAAGAAAAAACAAAACTGTAA

Upstream 100 bases:

>100_bases
GCCCGGATTGCCAGATTGAAACCGTCGAATACAGCGGGGACTATACCTGTGATCCAAGCGCGTCGGTTGAAACATCCACA
AAGTTGTAAGGAGGATCGTA

Downstream 100 bases:

>100_bases
AACATTGTTCTGTTATACAAAAAGGGTGCTCTTTCAGGAGCACCCTTTTTTATTCTTTTCCAGGCTTGCTTTCGTATCCT
GCGGTAAAAATTGATACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
METTKLGNLKLYGAGHAAGGAYHNVSIKGEGIVGEGLSAVGCRIYGTGLFLGKAETERLRVLGESECKGDLTAGKINIYG
TMKVSGSLQFDRFNLKGQTEIGGNMTGESCDVKGKLSVIGDCETEMFHVTGCVDVSGLLNSGEIKLGLSHDISHVQEIGG
TTITVKRRASFFSRKKGKLIADVIEGDRVYLENTEAAVVRGKEVIIGPGCSIGTIEYEYKCECDPHSQIKEKTKL

Sequences:

>Translated_235_residues
METTKLGNLKLYGAGHAAGGAYHNVSIKGEGIVGEGLSAVGCRIYGTGLFLGKAETERLRVLGESECKGDLTAGKINIYG
TMKVSGSLQFDRFNLKGQTEIGGNMTGESCDVKGKLSVIGDCETEMFHVTGCVDVSGLLNSGEIKLGLSHDISHVQEIGG
TTITVKRRASFFSRKKGKLIADVIEGDRVYLENTEAAVVRGKEVIIGPGCSIGTIEYEYKCECDPHSQIKEKTKL
>Mature_235_residues
METTKLGNLKLYGAGHAAGGAYHNVSIKGEGIVGEGLSAVGCRIYGTGLFLGKAETERLRVLGESECKGDLTAGKINIYG
TMKVSGSLQFDRFNLKGQTEIGGNMTGESCDVKGKLSVIGDCETEMFHVTGCVDVSGLLNSGEIKLGLSHDISHVQEIGG
TTITVKRRASFFSRKKGKLIADVIEGDRVYLENTEAAVVRGKEVIIGPGCSIGTIEYEYKCECDPHSQIKEKTKL

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHBF_BACSU (P39133)

Other databases:

- EMBL:   X79388
- EMBL:   AL009126
- EMBL:   Z93102
- EMBL:   U58864
- PIR:   JC4603
- RefSeq:   NP_388777.2
- ProteinModelPortal:   P39133
- EnsemblBacteria:   EBBACT00000002107
- GeneID:   936219
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08960
- NMPDR:   fig|224308.1.peg.896
- GenoList:   BSU08960
- GeneTree:   EBGT00050000001266
- HOGENOM:   HBG338662
- ProtClustDB:   CLSK2539619
- BioCyc:   BSUB:BSU08960-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25070; Mature: 25070

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTKLGNLKLYGAGHAAGGAYHNVSIKGEGIVGEGLSAVGCRIYGTGLFLGKAETERLR
CCCCCCCCEEEEECCCCCCCEEEEEEEEECCEECCCCCCCEEEEEEEEEEEECCCCCEEE
VLGESECKGDLTAGKINIYGTMKVSGSLQFDRFNLKGQTEIGGNMTGESCDVKGKLSVIG
EECCCCCCCCEEECEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE
DCETEMFHVTGCVDVSGLLNSGEIKLGLSHDISHVQEIGGTTITVKRRASFFSRKKGKLI
CCCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEHHHHHHCCCCCEE
ADVIEGDRVYLENTEAAVVRGKEVIIGPGCSIGTIEYEYKCECDPHSQIKEKTKL
EEEECCCEEEEECCCEEEEECCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
METTKLGNLKLYGAGHAAGGAYHNVSIKGEGIVGEGLSAVGCRIYGTGLFLGKAETERLR
CCCCCCCCEEEEECCCCCCCEEEEEEEEECCEECCCCCCCEEEEEEEEEEEECCCCCEEE
VLGESECKGDLTAGKINIYGTMKVSGSLQFDRFNLKGQTEIGGNMTGESCDVKGKLSVIG
EECCCCCCCCEEECEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE
DCETEMFHVTGCVDVSGLLNSGEIKLGLSHDISHVQEIGGTTITVKRRASFFSRKKGKLI
CCCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEHHHHHHCCCCCEE
ADVIEGDRVYLENTEAAVVRGKEVIIGPGCSIGTIEYEYKCECDPHSQIKEKTKL
EEEECCCEEEEECCCEEEEECCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377