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The map label for this gene is yddN

Identifier: 16077571

GI number: 16077571

Start: 550240

End: 551259

Strand: Reverse

Name: yddN

Synonym: BSU05040

Alternate gene names: 16077571

Gene position: 551259-550240 (Counterclockwise)

Preceding gene: 16077573

Following gene: 16077567

Centisome position: 13.08

GC content: 38.33

Gene sequence:

>1020_bases
ATGAAAAAATTTGATATATCTGTTTTATCAGTTGCTCCATTAAGACAAGGAGAAACAATGAAACAAGGGATTGATTCTGC
AGTGTCATTAGCTAAAGCTGTAGATAATATGGGCTATAAACGGATTTGGTTTGCAGAGCATCATAATCACGACGCTTATG
CAAGTGCAGCAACCGTATCAATTGTACAACATATATTAGCAAATACAAAAGACATTCGCGTAGGTTCAGGGGGTATTATG
TTGCCAAATCATTCCCCATTAATCGTAGCGGAGCAATTTGGAACACTTGAAACATTATATCCAAATCGTGTAGATTTGGC
ATTAGGACGCGCACCCGGAACGGATCAAAAAACGGCCGATGTGATTCGTCGTTCCAACCATAATGGAGTGTTTTTCTTTG
AAAGAGAAGTAAATGATATTTTGCGTTTTGTCGGGGATAAGAGTGTACAGGGTGAGGTTCGCGCTTATCCGGGTATTGGA
ACGCATGTGCCTGTTTTTGTGTTAGGATCCTCAACGGATTCAGCGGAAATTGCTGCAAAGCTTGGTTTACCCTATGCATT
TGGCGCTCAATTTTCACCCCATTCGATGGAAGAAGCGCTCTCTATTTATCGAGAAAATTTCCAACCGTCTTCTTATTTAC
AAGAACCTTATGTGATCGCTTGCATTAATGTGATTGCAGCAGAATCTATAGACGAGGCATCTTTTATTTCTGCAAGTCAT
TTGCAGGTGTATATTGATATTTATACAAATAATTTAAGTAAGCTTATTCCACCCACTGAAAACTTCCTAGAATCGTTATC
ACAGTTTGAATTAGAAATTCTCCACAGTCGACTGGGGTATACAATCATGGGTGATCGAGAAACAATTCGTCGCGAACTAA
TTGATTTCCAACAAATGTATCACGCAGATGAATTAATTGTGTTATCTAATATTTACGAATTGAGCAAGGAAATTCAGTCG
TACGAGATTTTAAAACAGGTTGTGGATGAGTTGTTTAAAAAAAGAATGGAGCAACTTTAG

Upstream 100 bases:

>100_bases
TGCAAATCAAAGAGGAATGGACACCATTTAATATGAAACAATTTTTCAAAATGTTTTTTCCATTGATCTTGTATAAGTTC
ATTATTTTAGAGGTGAAATT

Downstream 100 bases:

>100_bases
AAATCGAGTCAGTTGTATTAGCTTATGTTCTCCTCAAGCGCGATTGTTGAACAAGAAAGAAAAGGGTGATACATATTAAT
CATGTATAATATGTATCACC

Product: alkanal monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKKFDISVLSVAPLRQGETMKQGIDSAVSLAKAVDNMGYKRIWFAEHHNHDAYASAATVSIVQHILANTKDIRVGSGGIM
LPNHSPLIVAEQFGTLETLYPNRVDLALGRAPGTDQKTADVIRRSNHNGVFFFEREVNDILRFVGDKSVQGEVRAYPGIG
THVPVFVLGSSTDSAEIAAKLGLPYAFGAQFSPHSMEEALSIYRENFQPSSYLQEPYVIACINVIAAESIDEASFISASH
LQVYIDIYTNNLSKLIPPTENFLESLSQFELEILHSRLGYTIMGDRETIRRELIDFQQMYHADELIVLSNIYELSKEIQS
YEILKQVVDELFKKRMEQL

Sequences:

>Translated_339_residues
MKKFDISVLSVAPLRQGETMKQGIDSAVSLAKAVDNMGYKRIWFAEHHNHDAYASAATVSIVQHILANTKDIRVGSGGIM
LPNHSPLIVAEQFGTLETLYPNRVDLALGRAPGTDQKTADVIRRSNHNGVFFFEREVNDILRFVGDKSVQGEVRAYPGIG
THVPVFVLGSSTDSAEIAAKLGLPYAFGAQFSPHSMEEALSIYRENFQPSSYLQEPYVIACINVIAAESIDEASFISASH
LQVYIDIYTNNLSKLIPPTENFLESLSQFELEILHSRLGYTIMGDRETIRRELIDFQQMYHADELIVLSNIYELSKEIQS
YEILKQVVDELFKKRMEQL
>Mature_339_residues
MKKFDISVLSVAPLRQGETMKQGIDSAVSLAKAVDNMGYKRIWFAEHHNHDAYASAATVSIVQHILANTKDIRVGSGGIM
LPNHSPLIVAEQFGTLETLYPNRVDLALGRAPGTDQKTADVIRRSNHNGVFFFEREVNDILRFVGDKSVQGEVRAYPGIG
THVPVFVLGSSTDSAEIAAKLGLPYAFGAQFSPHSMEEALSIYRENFQPSSYLQEPYVIACINVIAAESIDEASFISASH
LQVYIDIYTNNLSKLIPPTENFLESLSQFELEILHSRLGYTIMGDRETIRRELIDFQQMYHADELIVLSNIYELSKEIQS
YEILKQVVDELFKKRMEQL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains

Homologues:

Organism=Escherichia coli, GI1789551, Length=331, Percent_Identity=39.5770392749245, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDDN_BACSU (P96651)

Other databases:

- EMBL:   AB001488
- EMBL:   AL009126
- PIR:   F69776
- RefSeq:   NP_388385.1
- ProteinModelPortal:   P96651
- EnsemblBacteria:   EBBACT00000003676
- GeneID:   938133
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU05040
- NMPDR:   fig|224308.1.peg.504
- GenoList:   BSU05040
- GeneTree:   EBGT00050000000501
- HOGENOM:   HBG366829
- OMA:   DEDHEER
- PhylomeDB:   P96651
- BioCyc:   BSUB:BSU05040-MONOMER
- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03558

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: NA

Molecular weight: Translated: 38034; Mature: 38034

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFDISVLSVAPLRQGETMKQGIDSAVSLAKAVDNMGYKRIWFAEHHNHDAYASAATVS
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
IVQHILANTKDIRVGSGGIMLPNHSPLIVAEQFGTLETLYPNRVDLALGRAPGTDQKTAD
HHHHHHCCCCCEEECCCCEECCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCHHHHH
VIRRSNHNGVFFFEREVNDILRFVGDKSVQGEVRAYPGIGTHVPVFVLGSSTDSAEIAAK
HHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHH
LGLPYAFGAQFSPHSMEEALSIYRENFQPSSYLQEPYVIACINVIAAESIDEASFISASH
HCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHEEECC
LQVYIDIYTNNLSKLIPPTENFLESLSQFELEILHSRLGYTIMGDRETIRRELIDFQQMY
EEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH
HADELIVLSNIYELSKEIQSYEILKQVVDELFKKRMEQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFDISVLSVAPLRQGETMKQGIDSAVSLAKAVDNMGYKRIWFAEHHNHDAYASAATVS
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
IVQHILANTKDIRVGSGGIMLPNHSPLIVAEQFGTLETLYPNRVDLALGRAPGTDQKTAD
HHHHHHCCCCCEEECCCCEECCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCHHHHH
VIRRSNHNGVFFFEREVNDILRFVGDKSVQGEVRAYPGIGTHVPVFVLGSSTDSAEIAAK
HHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHH
LGLPYAFGAQFSPHSMEEALSIYRENFQPSSYLQEPYVIACINVIAAESIDEASFISASH
HCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHEEECC
LQVYIDIYTNNLSKLIPPTENFLESLSQFELEILHSRLGYTIMGDRETIRRELIDFQQMY
EEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH
HADELIVLSNIYELSKEIQSYEILKQVVDELFKKRMEQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377