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The map label for this gene is yddK

Identifier: 16077567

GI number: 16077567

Start: 546166

End: 546966

Strand: Reverse

Name: yddK

Synonym: BSU05000

Alternate gene names: 16077567

Gene position: 546966-546166 (Counterclockwise)

Preceding gene: 16077571

Following gene: 16077549

Centisome position: 12.97

GC content: 29.71

Gene sequence:

>801_bases
ATGGACACATTAAAAAAATTAAAATTTGAGGCTAATGGAATTATAGGAGTACTTCTAGATTACTCTCGCGAGCCTGTACT
CACAAATATTATTGATCAATTTCGAACATCTCTTGAATCAAATGATATTGAGTTAATTCGTTATTCACTAGAACAACTTA
AGACTTGGTATGCACGAAACCGCAATGAAATATATAAAAATGAATTTGTTTTTAATGAGTTTGAACATCATGAAACAGAA
AATAAAATAAAAAAATTTTTAGATGAATTGCCTGTAGTAGATGAGACTGAAAAAAGCAGCATAACTCACTTTTCAAGTGA
TCAAAATAGAGAATTAGAGAAAAAAATATTTATTAGCCACTCCTCAAAAGACAAAATTGTATGTAATGCTTTCGTTGAAT
TACTAGAGGATATAGGAGTGTCTTCTGAAGATATAATATACACTTCTTCACCTTATCATGGTATTCCTGGAGATGAAGAT
ATTTTCGAATATCTAAAAAAACATCTTTTTAAGGGTGCATATGTCTTTTATATGTTATCCGATAATTACTATGATAGCGT
ATACTGCCTTAATGAAATGGGGGCTACTTGGGTGAATAGCAATAACTGCTCTACTTTCATCCTCCCTGGTTTTAAGGGCG
AAATAAAAGGAGTAATTGATAAAAATAAAAAAGCATTCTCCTTGGAGGAACCAATAGACTTATTTAATTTAAAAGAAAAA
ATACTCCGTATGTATGATCTCACATTAGAAGATAAAAAATGGGAAAGGATAAAGGCTAAATTTAATACGAAATTAAAATA
A

Upstream 100 bases:

>100_bases
AGACTGCTTTAAAATAAGTAGTTAGAATAGGAGTCTATGTTATATAATTAGATATGAAATGTTTACAAACAATGGATTAA
ATTAGGTCGGAGGAAATCTA

Downstream 100 bases:

>100_bases
CTTAAATGCCACTGCTAGTAGCACCAATAGTGTAAAAACAACTTTTACCCATAAATCTATTCTTAGAAGACATATTTGAT
TTAGTTTCCAACTTATAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDTLKKLKFEANGIIGVLLDYSREPVLTNIIDQFRTSLESNDIELIRYSLEQLKTWYARNRNEIYKNEFVFNEFEHHETE
NKIKKFLDELPVVDETEKSSITHFSSDQNRELEKKIFISHSSKDKIVCNAFVELLEDIGVSSEDIIYTSSPYHGIPGDED
IFEYLKKHLFKGAYVFYMLSDNYYDSVYCLNEMGATWVNSNNCSTFILPGFKGEIKGVIDKNKKAFSLEEPIDLFNLKEK
ILRMYDLTLEDKKWERIKAKFNTKLK

Sequences:

>Translated_266_residues
MDTLKKLKFEANGIIGVLLDYSREPVLTNIIDQFRTSLESNDIELIRYSLEQLKTWYARNRNEIYKNEFVFNEFEHHETE
NKIKKFLDELPVVDETEKSSITHFSSDQNRELEKKIFISHSSKDKIVCNAFVELLEDIGVSSEDIIYTSSPYHGIPGDED
IFEYLKKHLFKGAYVFYMLSDNYYDSVYCLNEMGATWVNSNNCSTFILPGFKGEIKGVIDKNKKAFSLEEPIDLFNLKEK
ILRMYDLTLEDKKWERIKAKFNTKLK
>Mature_266_residues
MDTLKKLKFEANGIIGVLLDYSREPVLTNIIDQFRTSLESNDIELIRYSLEQLKTWYARNRNEIYKNEFVFNEFEHHETE
NKIKKFLDELPVVDETEKSSITHFSSDQNRELEKKIFISHSSKDKIVCNAFVELLEDIGVSSEDIIYTSSPYHGIPGDED
IFEYLKKHLFKGAYVFYMLSDNYYDSVYCLNEMGATWVNSNNCSTFILPGFKGEIKGVIDKNKKAFSLEEPIDLFNLKEK
ILRMYDLTLEDKKWERIKAKFNTKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDDK_BACSU (P96648)

Other databases:

- EMBL:   AB001488
- EMBL:   AL009126
- PIR:   D69776
- RefSeq:   NP_388381.1
- ProteinModelPortal:   P96648
- EnsemblBacteria:   EBBACT00000001578
- GeneID:   939917
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU05000
- NMPDR:   fig|224308.1.peg.500
- GenoList:   BSU05000
- GeneTree:   EBGT00070000035630
- BioCyc:   BSUB:BSU05000-MONOMER
- InterPro:   IPR000157
- SMART:   SM00255

Pfam domain/function: SSF52200 TIR

EC number: NA

Molecular weight: Translated: 31289; Mature: 31289

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLKKLKFEANGIIGVLLDYSREPVLTNIIDQFRTSLESNDIELIRYSLEQLKTWYARN
CCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
RNEIYKNEFVFNEFEHHETENKIKKFLDELPVVDETEKSSITHFSSDQNRELEKKIFISH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEC
SSKDKIVCNAFVELLEDIGVSSEDIIYTSSPYHGIPGDEDIFEYLKKHLFKGAYVFYMLS
CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
DNYYDSVYCLNEMGATWVNSNNCSTFILPGFKGEIKGVIDKNKKAFSLEEPIDLFNLKEK
CCCCCCEEEHHHCCCEEECCCCCCEEEECCCCCCCHHHCCCCCCEECCCCCHHHHHHHHH
ILRMYDLTLEDKKWERIKAKFNTKLK
HHHHHCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTLKKLKFEANGIIGVLLDYSREPVLTNIIDQFRTSLESNDIELIRYSLEQLKTWYARN
CCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
RNEIYKNEFVFNEFEHHETENKIKKFLDELPVVDETEKSSITHFSSDQNRELEKKIFISH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEC
SSKDKIVCNAFVELLEDIGVSSEDIIYTSSPYHGIPGDEDIFEYLKKHLFKGAYVFYMLS
CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
DNYYDSVYCLNEMGATWVNSNNCSTFILPGFKGEIKGVIDKNKKAFSLEEPIDLFNLKEK
CCCCCCEEEHHHCCCEEECCCCCCEEEECCCCCCCHHHCCCCCCEECCCCCHHHHHHHHH
ILRMYDLTLEDKKWERIKAKFNTKLK
HHHHHCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377