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The map label for this gene is ybbC

Identifier: 16077233

GI number: 16077233

Start: 185194

End: 186438

Strand: Reverse

Name: ybbC

Synonym: BSU01650

Alternate gene names: 16077233

Gene position: 186438-185194 (Counterclockwise)

Preceding gene: 16077234

Following gene: 16077232

Centisome position: 4.42

GC content: 43.94

Gene sequence:

>1245_bases
ATGAGAAAAACAATATTCGCTTTTCTGACAGGGCTCATGATGTTCGGAACGATAACCGCTGCCTCTGCTTCACCCGATTC
AAAGAATCAAACAGCTAAAAAACCTAAAGTCCAGACTGGGATAGACACGCTCTTGCCAGACTATAAAAAACAGCTCAAGG
GAAAACGCATCGGACTGATCACCAATCCAGCCGGAGTAAACACATCTCTAAAAAGCAGTGTCGATATCCTTTACGAGAAC
CCGGATATCAAACTGACAGCTTTATTCGGCCCTGAACACGGCGTCCGCGGTGACGCCCAGGCTGGAGACGAAGTAGGCTC
TTACATTGACGAAAAAACCGGGGTTCCCGTATACAGCCTCTACGGAAAAACGAAAAAACCGACTCCAGAAATGCTTAAAA
ATGTCGATATTCTAATGTTTGACATTCAGGATGTCGGGACCCGTTTCTACACGTACATTTATACAATGGCATACGCAATG
GAAGCCGCTAAAGAAAACGGCATTCCATTTATGGTGCTGGACCGTCCGAATCCTCAAGGCGGGAATCATATTGAAGGACC
AATCTTAGAACCTGAATACGCCTCATTTGTCGGATTGTATCCCATTCCATTGAAGCATGGGATGACGATAGGCGAATTGG
CTTCACTGTTCAACAAAGAATTTAGTATTGATGCCGATCTTACAGTGGTAAAAATGAAACACTGGAAACGAAAAATGGAT
TTTGACGATACCCGATTGCCTTTCGTCCTCCCTTCGCCTAACATGCCGACGGTGGAAAGCACATTTGTTTATCCTGCAAC
CGGGCTGATTGAAGGAACAAATATATCCGAAGGGCGAGGGACAACAAAGCCATTCGAATTGATCGGAGCTCCCTTTATCA
AAAGCACAGAACTTGAAGAAACATTAAACAGCCTCCATTTGCCGGGCGTTACATTTAGGGCAGCATCCTTCACACCGACG
TTTTCTAAACATCAAGGAACGCTTTGCCACGGTGTGCAGCTCTATGTGACAGACAGAGATAAGTTTGAAGCCGTTAAAAC
GGGTCTTTCAGTCATTAAAACCATACACGATCTCTATCCTGAGGATTTTGAGTTCCTGTCAACAGGTTCATTCGATAAAC
TGGCAGGCAACGGCTGGATCAGGACAAAAATTGAAAATGGAACTTCGGTTGAGAACATCATAAACAGCTATGAAAAAACA
CTCCAACAATTCAGCAAAACAAGAAAAAAGTATCTCATTTATTAG

Upstream 100 bases:

>100_bases
GTTGACATTCCGTCAGTCACGAAACCAGGGAACACCCTTTACCCACTTGGCTACGGATTAAATATCAAAACGGGAAGACC
GCTTTAATAAGGAGGGACAC

Downstream 100 bases:

>100_bases
AACATAAGCATCGTATGTTACACGTGTAACATATTCTTATTGAACGAAAGACCCTTACTTTTACACATAAGTAAGGGTTT
TTTTCATGCTAAAAACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYEN
PDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAM
EAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMD
FDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPT
FSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKT
LQQFSKTRKKYLIY

Sequences:

>Translated_414_residues
MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYEN
PDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAM
EAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMD
FDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPT
FSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKT
LQQFSKTRKKYLIY
>Mature_414_residues
MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYEN
PDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAM
EAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMD
FDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPT
FSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKT
LQQFSKTRKKYLIY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBBC_BACSU (P40407)

Other databases:

- EMBL:   L19954
- EMBL:   AB002150
- EMBL:   AL009126
- PIR:   I39840
- RefSeq:   NP_388046.1
- EnsemblBacteria:   EBBACT00000001923
- GeneID:   938889
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU01650
- NMPDR:   fig|224308.1.peg.165
- GenoList:   BSU01650
- GeneTree:   EBGT00050000001390
- HOGENOM:   HBG560211
- OMA:   MINGEGW
- ProtClustDB:   CLSK872789
- BioCyc:   BSUB:BSU01650-MONOMER
- InterPro:   IPR008302
- PIRSF:   PIRSF016719

Pfam domain/function: PF07075 DUF1343

EC number: NA

Molecular weight: Translated: 46036; Mature: 46036

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCEEEEE
TNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSL
ECCCCCCCCHHCCEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
YGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQG
CCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMD
CCCCCCCCCCCCHHHEEECCCCCHHCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCC
FDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEE
CCCCCCCEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCHHH
TLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYP
HHHHHCCCCEEEEECCCCCCHHCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHHCC
EDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY
CCHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCEEEEE
TNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSL
ECCCCCCCCHHCCEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
YGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQG
CCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
GNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMD
CCCCCCCCCCCCHHHEEECCCCCHHCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCC
FDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEE
CCCCCCCEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCHHH
TLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYP
HHHHHCCCCEEEEECCCCCCHHCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHHCC
EDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY
CCHHHHCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377