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The map label for this gene is gerD

Identifier: 16077223

GI number: 16077223

Start: 158515

End: 159072

Strand: Reverse

Name: gerD

Synonym: BSU01550

Alternate gene names: 16077223

Gene position: 159072-158515 (Counterclockwise)

Preceding gene: 16077225

Following gene: 16077105

Centisome position: 3.77

GC content: 37.1

Gene sequence:

>558_bases
ATGTCAAAAGCCAAAACGCTATTGATGAGCTGTTTTTTGTTATTATCTGTAACAGCTTGCGCTCCAAAAGACCAAGCAGC
GGATATGGACTATGATCAGACCAAAAAAATGGTTGTTGATATATTAAAAACTGATGATGGAAAGAAAGCTATTAAGGAAT
TATTAAATGATGATGCCATGAATGAAGCGCTGGTGATTGACCAAGATGCAATTAAAGGAACAATAGAAAAAACACTCACA
TCTAAAAAAGGTGAAGAATTTTGGAAAAACATCTTTGAAGACACTGATTTTGCTGAGGGCTTTGCCAAAACTCTTCAGAC
AGAGCATGAAAAAGTGATTAAAAAGCTGATGAAGGATCCAGATTACCAGAAGATGCTGATGAGCGTTATGCAGGATCCCG
GCATGGATAAAAAGTACAGCCAGCTGGCAAAAAGCCAAGAATTCCGCAGTTATTTAGAAGAGGTTATTAACGAAACACTT
TCTAGTCCGCTTTACAAAAAGCAGTTCGAAGATGAGCTGAAAAAAGCAGCAAAAGACACAGCAAAAGAAAGTGAATAA

Upstream 100 bases:

>100_bases
CATCCCCTCAAAAATCGCGAACAGCGATATTTTGTTATGTATAATTCCAAACAGATGAATCATATTAAAGGTAAGACAAG
TATGTGAAAGGAGCTTAAGC

Downstream 100 bases:

>100_bases
AGGGAAAGCCGGGATCTGGAATCCCGGTTCACCTTTTATACCTGCACTGACATTTTTGCATCTATTTTTTTTGCGATGTC
CTGATATATTTCTCCGATTG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLT
SKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETL
SSPLYKKQFEDELKKAAKDTAKESE

Sequences:

>Translated_185_residues
MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLT
SKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETL
SSPLYKKQFEDELKKAAKDTAKESE
>Mature_184_residues
SKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLTS
KKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLS
SPLYKKQFEDELKKAAKDTAKESE

Specific function: May be involved in fructose recognition during germination

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERD_BACSU (P16450)

Other databases:

- EMBL:   M27259
- EMBL:   D64126
- EMBL:   AL009126
- EMBL:   U23797
- EMBL:   X74737
- PIR:   A37207
- RefSeq:   NP_388036.1
- ProteinModelPortal:   P16450
- EnsemblBacteria:   EBBACT00000001010
- GeneID:   938910
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU01550
- NMPDR:   fig|224308.1.peg.155
- GenoList:   BSU01550
- GeneTree:   EBGT00050000002818
- HOGENOM:   HBG313539
- OMA:   MKDPEYQ
- ProtClustDB:   CLSK872652
- BioCyc:   BSUB:BSU01550-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21117; Mature: 20986

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHC
NEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDP
CCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDT
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AKESE
HCCCC
>Mature Secondary Structure 
SKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAM
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHC
NEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDP
CCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DYQKMLMSVMQDPGMDKKYSQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDT
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AKESE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2517635; 8969501; 9384377; 8576055; 7559346