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The map label for this gene is ycaI [C]

Identifier: 15606730

GI number: 15606730

Start: 1136058

End: 1137299

Strand: Direct

Name: ycaI [C]

Synonym: aq_1618

Alternate gene names: 15606730

Gene position: 1136058-1137299 (Clockwise)

Preceding gene: 15606718

Following gene: 15606731

Centisome position: 73.23

GC content: 43.32

Gene sequence:

>1242_bases
GTGGATTTTTTAAGAAAATTGCCCCTCGGGCTTACAATACACCTATCACTTTTCCTGCTATCCCTTTTATACGCACTGAA
TGCCGGAAGACTCCCCGAACTAAAGGACTACATAATCTACTTTAAGGTTCGTTTAGAAGGTCAGTGGGAGCTCTCCGAAG
ATGGAGTATCCGCTCCAGTGTTTGTTGAGGAGTCGGAAATAGAGTTCTTAAAAGGGAGGAAAGCTTTTTTATTCGTGAAG
AAAGCAAGATATATCCCGAAAGGAAGCAGGTTTGAGCTTTTCGGAAACGTAAGAGTAAAGAAAAACAGGGTGTTTATAAG
CGCCTACATCTGGGATTTAGAAAGACTTCCTGAAAAGAAAAACATCAGGGATTTCTTAATGGAGAAGTTTAAAGAAAAGG
TAAAAGACGAGCACCTGAGAGCTATAGGGCTTGCCTTTTTGTTCGGGGAGAGTAAGAGAAACCTCCCCGCTGAAGTGGAA
AGGGTTTTCCTACACACGGGACTTATACACGTCCTCGTAGTATCCGGACTTCACGTAGGACTCGTTTTCTTAATCCTTTC
CCGCCTCCTTCCGAGGTTCTACGGTGAAGTTCTGGGATTAGTAGGCGTTCTCTTTTACTCCGCCTTTTTGGTTCCACACA
ACCCGCCGGTCATAAGAGCTACGTCCATGCTCTTCCTGTGGGTGCTTTCCTTTCTTTCCTTCAGGCGCTACTGCTCCCTC
TGCGTTCTCTTCTTTACCGGGACTTTAATGCTTTTCTTCTTTCCCCACTTTTCTTACTCTTACTCCTTCTGGCTTTCCTT
CTTTGCGGTTTTATACATTCTTCTCGTTTTGAAGGACTTTGAAGGTGGAAACACCTCAAAAGCCCTTATGGTTTCACTCG
GTGCCTTTACAGGAACCGCACCCTTGATAGCGAGTTTTTCCTTTGTAACTCCCCTTTCTGTCCTACTCACACCTGTTCTC
TCTCCTTTGATTTTCGCGTACGCCCTTTTCGGAGTTTTGTCCCTCCTTACGCTCTTTTCCTTTCCCCCTTCTTTAATCCT
TATGAACCTGAGCGGAGAGCTTATCTTCAGAGTCCTTGAATTTTTCTCTGACTTTTCGCCCAAAATTCTCAGTAATGTAA
AACCAGAAGAGGCTTTTATTCTTCTAATACTGGGAGCTATCGGACTTTACGTCACAAAAGGTTATTCCAAACTTCTTCCT
TTGGGTGTTGTAAACCTATATCTAATCTTTAAAATAAATTAA

Upstream 100 bases:

>100_bases
GAGTAGACTCTGAATGCCGTCTCTGAGCGAGACATCCGTAACTTTGATTTCCCTCATGCTATCACCTCACCAGCTTTAAA
AACTAATAATATAATACGAG

Downstream 100 bases:

>100_bases
AACATTTTTTTACTTTCGGAGGTGGATGTATGAAGCTCCACGAACATCAGGCAAAGGAGATATTTGCAAAATACGGAATT
CCCGTTCCGGAAGGCAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDFLRKLPLGLTIHLSLFLLSLLYALNAGRLPELKDYIIYFKVRLEGQWELSEDGVSAPVFVEESEIEFLKGRKAFLFVK
KARYIPKGSRFELFGNVRVKKNRVFISAYIWDLERLPEKKNIRDFLMEKFKEKVKDEHLRAIGLAFLFGESKRNLPAEVE
RVFLHTGLIHVLVVSGLHVGLVFLILSRLLPRFYGEVLGLVGVLFYSAFLVPHNPPVIRATSMLFLWVLSFLSFRRYCSL
CVLFFTGTLMLFFFPHFSYSYSFWLSFFAVLYILLVLKDFEGGNTSKALMVSLGAFTGTAPLIASFSFVTPLSVLLTPVL
SPLIFAYALFGVLSLLTLFSFPPSLILMNLSGELIFRVLEFFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLLP
LGVVNLYLIFKIN

Sequences:

>Translated_413_residues
MDFLRKLPLGLTIHLSLFLLSLLYALNAGRLPELKDYIIYFKVRLEGQWELSEDGVSAPVFVEESEIEFLKGRKAFLFVK
KARYIPKGSRFELFGNVRVKKNRVFISAYIWDLERLPEKKNIRDFLMEKFKEKVKDEHLRAIGLAFLFGESKRNLPAEVE
RVFLHTGLIHVLVVSGLHVGLVFLILSRLLPRFYGEVLGLVGVLFYSAFLVPHNPPVIRATSMLFLWVLSFLSFRRYCSL
CVLFFTGTLMLFFFPHFSYSYSFWLSFFAVLYILLVLKDFEGGNTSKALMVSLGAFTGTAPLIASFSFVTPLSVLLTPVL
SPLIFAYALFGVLSLLTLFSFPPSLILMNLSGELIFRVLEFFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLLP
LGVVNLYLIFKIN
>Mature_413_residues
MDFLRKLPLGLTIHLSLFLLSLLYALNAGRLPELKDYIIYFKVRLEGQWELSEDGVSAPVFVEESEIEFLKGRKAFLFVK
KARYIPKGSRFELFGNVRVKKNRVFISAYIWDLERLPEKKNIRDFLMEKFKEKVKDEHLRAIGLAFLFGESKRNLPAEVE
RVFLHTGLIHVLVVSGLHVGLVFLILSRLLPRFYGEVLGLVGVLFYSAFLVPHNPPVIRATSMLFLWVLSFLSFRRYCSL
CVLFFTGTLMLFFFPHFSYSYSFWLSFFAVLYILLVLKDFEGGNTSKALMVSLGAFTGTAPLIASFSFVTPLSVLLTPVL
SPLIFAYALFGVLSLLTLFSFPPSLILMNLSGELIFRVLEFFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLLP
LGVVNLYLIFKIN

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1618_AQUAE (O67545)

Other databases:

- EMBL:   AE000657
- PIR:   G70439
- RefSeq:   NP_214110.1
- GeneID:   1193168
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1618
- NMPDR:   fig|224324.1.peg.1125
- ProtClustDB:   CLSK2299771
- BioCyc:   AAEO224324:AQ_1618-MONOMER
- InterPro:   IPR004477
- TIGRFAMs:   TIGR00360

Pfam domain/function: PF03772 Competence

EC number: NA

Molecular weight: Translated: 47051; Mature: 47051

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe2d5570)-; HASH(0xe10cb50)-; HASH(0xe21bea4)-; HASH(0xe2a3374)-; HASH(0xd9e30ec)-; HASH(0xd9642ac)-; HASH(0xe28bc68)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLRKLPLGLTIHLSLFLLSLLYALNAGRLPELKDYIIYFKVRLEGQWELSEDGVSAPV
CCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEEEECCCEEECCCCCCCCE
FVEESEIEFLKGRKAFLFVKKARYIPKGSRFELFGNVRVKKNRVFISAYIWDLERLPEKK
EEECCHHHHHCCCHHEEEEEHHHCCCCCCCEEEEECEEEEECEEEEEHHHHHHHHCCCCC
NIRDFLMEKFKEKVKDEHLRAIGLAFLFGESKRNLPAEVERVFLHTGLIHVLVVSGLHVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVFLILSRLLPRFYGEVLGLVGVLFYSAFLVPHNPPVIRATSMLFLWVLSFLSFRRYCSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CVLFFTGTLMLFFFPHFSYSYSFWLSFFAVLYILLVLKDFEGGNTSKALMVSLGAFTGTA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCCCCH
PLIASFSFVTPLSVLLTPVLSPLIFAYALFGVLSLLTLFSFPPSLILMNLSGELIFRVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
FFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLLPLGVVNLYLIFKIN
HHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEH
>Mature Secondary Structure
MDFLRKLPLGLTIHLSLFLLSLLYALNAGRLPELKDYIIYFKVRLEGQWELSEDGVSAPV
CCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEEEECCCEEECCCCCCCCE
FVEESEIEFLKGRKAFLFVKKARYIPKGSRFELFGNVRVKKNRVFISAYIWDLERLPEKK
EEECCHHHHHCCCHHEEEEEHHHCCCCCCCEEEEECEEEEECEEEEEHHHHHHHHCCCCC
NIRDFLMEKFKEKVKDEHLRAIGLAFLFGESKRNLPAEVERVFLHTGLIHVLVVSGLHVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVFLILSRLLPRFYGEVLGLVGVLFYSAFLVPHNPPVIRATSMLFLWVLSFLSFRRYCSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CVLFFTGTLMLFFFPHFSYSYSFWLSFFAVLYILLVLKDFEGGNTSKALMVSLGAFTGTA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCCCCH
PLIASFSFVTPLSVLLTPVLSPLIFAYALFGVLSLLTLFSFPPSLILMNLSGELIFRVLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
FFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLLPLGVVNLYLIFKIN
HHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320