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The map label for this gene is 15606219

Identifier: 15606219

GI number: 15606219

Start: 607507

End: 608085

Strand: Direct

Name: 15606219

Synonym: aq_880

Alternate gene names: NA

Gene position: 607507-608085 (Clockwise)

Preceding gene: 15606216

Following gene: 15606222

Centisome position: 39.16

GC content: 45.94

Gene sequence:

>579_bases
ATGGATGTGTTCGTTCTCGACACGAGCGTTTTCACAAACCCGGAGATATACAGAACCTTTGAAGAGGATCAGAGAGGAGC
TATGGAAACCTTTATACACCTTGCCCTGAATTCCAGAGCTGAGTTTTACATGCCCACTTCCGTTTACACGGAAATGAGAA
AAATAATGGATGTGGGGGAACTCTGGGCGGAATTTGAGATGGTGGTAAAGATACGCTCTCCCAGGAGGTTTCAATTAACT
GTTCCCGCGGATTTTCTCTATGAGTTCATAGAAGAACTCAGATATAGGATTAATAAAGGTTTGAGGATAGCGGAAGAACA
CACGAGGGAAGCGAGCGGTTGTGAAGACGTCGGGAAATTAATAGCTAGGCTCAGGGAGAAGTACAGGGAAGCCCTCAGGC
AGGGAATACTCGACAGTAAAGAGGACGTGGATGTGCTGCTCCTTGCCTACGAACTGGACGGGGTTCTCGTTTCGGCGGAT
GAAGGCCTCAGAACATGGGCGGACAAGATAGGTATAAAACTCATAGACCCTAAGAATTTCAAAAACATTTTAGAGAGCTT
GGTAAGACACAGGTTTTAA

Upstream 100 bases:

>100_bases
AGTAATTTATCTATGTTTCCTTTTTCCTTTATCTTTATCTGGATTACGGGAAGTGTTTTTCCCTTTATCTCTATCACCTT
AACTATTATTATAAGGAAGT

Downstream 100 bases:

>100_bases
ATGAGACGCCCGCCCTTCAGGGCGTCCCTCACCGCCTTTTCTATACCTTCAGCGTCTATACCGACGAGGTTTCTGAGTAT
GTCCTGCTTTCCGTGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTEMRKIMDVGELWAEFEMVVKIRSPRRFQLT
VPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKLIARLREKYREALRQGILDSKEDVDVLLLAYELDGVLVSAD
EGLRTWADKIGIKLIDPKNFKNILESLVRHRF

Sequences:

>Translated_192_residues
MDVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTEMRKIMDVGELWAEFEMVVKIRSPRRFQLT
VPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKLIARLREKYREALRQGILDSKEDVDVLLLAYELDGVLVSAD
EGLRTWADKIGIKLIDPKNFKNILESLVRHRF
>Mature_192_residues
MDVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTEMRKIMDVGELWAEFEMVVKIRSPRRFQLT
VPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKLIARLREKYREALRQGILDSKEDVDVLLLAYELDGVLVSAD
EGLRTWADKIGIKLIDPKNFKNILESLVRHRF

Specific function: Unknown

COG id: COG1458

COG function: function code R; Predicted DNA-binding protein containing PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0278 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y880_AQUAE (O67035)

Other databases:

- EMBL:   AE000657
- PIR:   H70375
- RefSeq:   NP_213597.1
- GeneID:   1193577
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_880
- NMPDR:   fig|224324.1.peg.612
- HOGENOM:   HBG507856
- OMA:   LLAYELD
- ProtClustDB:   PRK04358
- BioCyc:   AAEO224324:AQ_880-MONOMER
- HAMAP:   MF_01078
- InterPro:   IPR014856
- InterPro:   IPR022785
- TIGRFAMs:   TIGR03875

Pfam domain/function: PF08745 UPF0278

EC number: NA

Molecular weight: Translated: 22532; Mature: 22532

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTEMRKIMDVGE
CCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHH
LWAEFEMVVKIRSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKL
HHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHH
IARLREKYREALRQGILDSKEDVDVLLLAYELDGVLVSADEGLRTWADKIGIKLIDPKNF
HHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCEEEECCCHHHHHHHHCCEEEECCCCH
KNILESLVRHRF
HHHHHHHHHHCC
>Mature Secondary Structure
MDVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTEMRKIMDVGE
CCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHH
LWAEFEMVVKIRSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKL
HHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHH
IARLREKYREALRQGILDSKEDVDVLLLAYELDGVLVSADEGLRTWADKIGIKLIDPKNF
HHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCEEEECCCHHHHHHHHCCEEEECCCCH
KNILESLVRHRF
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320