| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606222
Identifier: 15606222
GI number: 15606222
Start: 613977
End: 614423
Strand: Direct
Name: 15606222
Synonym: aq_888
Alternate gene names: NA
Gene position: 613977-614423 (Clockwise)
Preceding gene: 15606219
Following gene: 15606223
Centisome position: 39.58
GC content: 46.53
Gene sequence:
>447_bases GTGGGAACCATGGCACTCTTTGACGAATGGTATCAAAAAGGACACCAGATCGTCCACGAAGTTATGAAGGAGCTCGGAAT TGAAGATGAGCACAAAGCCTTCAGACTTCTGAGAGCTGTTCTCCAAACCTTAAGGGATAGACTCCCCGCCAGTGAAGGAA AGGACTTTGCAGCTCAACTTCCGATGGTTTTGAAAGCAGTCTGGTGTGACGGCTGGGATCCAACAAGAGTGCCCGACAAG AGCATAAAACACAAACAGGACTTCCTTGAAAGAGTTATGAACCATCCCGGACTCAGGAGACCTGCGGACATTGAAAGCCT TGAAGACGCAGAAAGAGTTGTAACAGCAGTATTCAGAGTTCTAAAGAGACACATTTCTTACGGAGAGATAAAGGACGTCC TGAGCGAACTCCCCGAAGACATAAGAGAAATGTTAGAAAACGCTTAA
Upstream 100 bases:
>100_bases TCTTCTCAGGCAATTACTCTGATACTTGTCATCTTCGGGAAAGAGGTATATCTTAATAATCGTAAGCTAAACTTAGTTTA AAAAATCAAACTCAAAGGAG
Downstream 100 bases:
>100_bases TTTTTCCTTTCCCCTTTCTAAATTTTTTTATTGGAGTTGGAATATGAGGGTAAGAGAGCCGGCAGTTGCAGGAACTTTTT ACCCGAAGGATAAGGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDK SIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSELPEDIREMLENA
Sequences:
>Translated_148_residues MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDK SIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSELPEDIREMLENA >Mature_147_residues GTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQLPMVLKAVWCDGWDPTRVPDKS IKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRVLKRHISYGEIKDVLSELPEDIREMLENA
Specific function: Unknown
COG id: COG5502
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17188; Mature: 17057
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH PMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LKRHISYGEIKDVLSELPEDIREMLENA HHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTMALFDEWYQKGHQIVHEVMKELGIEDEHKAFRLLRAVLQTLRDRLPASEGKDFAAQL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH PMVLKAVWCDGWDPTRVPDKSIKHKQDFLERVMNHPGLRRPADIESLEDAERVVTAVFRV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LKRHISYGEIKDVLSELPEDIREMLENA HHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA