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Identifier: 15679024

GI number: 15679024

Start: 919056

End: 919631

Strand: Direct

Name: Not Available

Synonym: MTH1006

Alternate gene names: NA

Gene position: 919056-919631 (Clockwise)

Preceding gene: 15679023

Following gene: 15679025

Centisome position: 52.48

GC content: 47.92

Gene sequence:

>576_bases
GTGAATGAAATGCCAGCCGAGGAATACATTAAAATACCCCGTGAGAGGGTCGGAGTTTTAATAGGCAAAAACGGTGCGGT
TAAGGCAAAGATAGAGCGCCTGACCCAGACTGAACTGGAAATTGACAGCGAAACCGGTGCAGTTACTCTCATACCACAGG
ATGAACTGGAGGACCCCCTCTCACCATGGAAGGCCAGGCACATTGTCAGGGCCATAGGGAGGGGTTTCAACCCTGAGGTT
GCCCTGAGGCTCCTTGATGACGATGTCGCCCTTGAGGTCATCAAGATAACCGACTATGTTGGTAAATCCAAGAAGGCCAT
TGCAAGGCAGAAGGGCCGTGTCATCGGCCGTGAAGGTATAACAAGGCGTATAATCCATGATATGACCGGCGTGGACATAT
CTGTTTACGGCAAGACGGTTTCACTCATAGGAGAATTTGAGAAACTCGCTGTTGCCAGGGAAGCCATTGAAATGATACTT
AATGGTGCAAGACACAAATCTGTGTACGCATTTCTCGAAAAGAAGAAGCAGGAACTGAAAATGAAGGAGTTTCAGGAAGG
CGCTAAATTAATGTAA

Upstream 100 bases:

>100_bases
GATCCATAGGCCAGGAAGTCCCTGATAATCGGCAAACCCATGAAAATCAAAAAATATGGCCAAAAAACAGCATAATCCAT
AAACCATTTATTTCATCGAG

Downstream 100 bases:

>100_bases
ACTCCATCACAAACCTACTTTTCATGGGTGCTAACTTCAATTATTCTAAAGGTACCCCCTCAAAATGCATCTTCTGTAAT
AGTTACATATAGGGTATAAG

Product: putative RNA-processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNEMPAEEYIKIPRERVGVLIGKNGAVKAKIERLTQTELEIDSETGAVTLIPQDELEDPLSPWKARHIVRAIGRGFNPEV
ALRLLDDDVALEVIKITDYVGKSKKAIARQKGRVIGREGITRRIIHDMTGVDISVYGKTVSLIGEFEKLAVAREAIEMIL
NGARHKSVYAFLEKKKQELKMKEFQEGAKLM

Sequences:

>Translated_191_residues
MNEMPAEEYIKIPRERVGVLIGKNGAVKAKIERLTQTELEIDSETGAVTLIPQDELEDPLSPWKARHIVRAIGRGFNPEV
ALRLLDDDVALEVIKITDYVGKSKKAIARQKGRVIGREGITRRIIHDMTGVDISVYGKTVSLIGEFEKLAVAREAIEMIL
NGARHKSVYAFLEKKKQELKMKEFQEGAKLM
>Mature_191_residues
MNEMPAEEYIKIPRERVGVLIGKNGAVKAKIERLTQTELEIDSETGAVTLIPQDELEDPLSPWKARHIVRAIGRGFNPEV
ALRLLDDDVALEVIKITDYVGKSKKAIARQKGRVIGREGITRRIIHDMTGVDISVYGKTVSLIGEFEKLAVAREAIEMIL
NGARHKSVYAFLEKKKQELKMKEFQEGAKLM

Specific function: Unknown

COG id: COG1094

COG function: function code R; Predicted RNA-binding protein (contains KH domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 KH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR019964
- InterPro:   IPR004088
- InterPro:   IPR018111 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 21465; Mature: 21465

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEMPAEEYIKIPRERVGVLIGKNGAVKAKIERLTQTELEIDSETGAVTLIPQDELEDPL
CCCCCHHHHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHEECCCCCEEEEEECHHCCCCC
SPWKARHIVRAIGRGFNPEVALRLLDDDVALEVIKITDYVGKSKKAIARQKGRVIGREGI
CHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHH
TRRIIHDMTGVDISVYGKTVSLIGEFEKLAVAREAIEMILNGARHKSVYAFLEKKKQELK
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MKEFQEGAKLM
HHHHHCCCCCC
>Mature Secondary Structure
MNEMPAEEYIKIPRERVGVLIGKNGAVKAKIERLTQTELEIDSETGAVTLIPQDELEDPL
CCCCCHHHHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHEECCCCCEEEEEECHHCCCCC
SPWKARHIVRAIGRGFNPEVALRLLDDDVALEVIKITDYVGKSKKAIARQKGRVIGREGI
CHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHH
TRRIIHDMTGVDISVYGKTVSLIGEFEKLAVAREAIEMILNGARHKSVYAFLEKKKQELK
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MKEFQEGAKLM
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]