| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678612
GI number: 15678612
Start: 522010
End: 523374
Strand: Direct
Name: Not Available
Synonym: MTH584
Alternate gene names: 15678612
Gene position: 522010-523374 (Clockwise)
Preceding gene: 15678611
Following gene: 15678615
Centisome position: 29.81
GC content: 53.48
Gene sequence:
>1365_bases ATGACCACAGACTACAGCAACATACTCAAAACCATAAAACCCGACGGTGATGAATACCGGAGGGTCATGGAACTATCAGA CAGTCTCGTTGAGTGCCTGAATGGACTCGCAGAGGAACAGGGAATAGACGCCGAGGCCGTCCTCGTGGGTTCAGTTGCCA AGGGGACCTGGCTTTCAGGTGCTGCAGACATTGACATATTCATACACTTTCCCCTCACGACCCCAGAGGATGAACTCAAG GAGAGTGGCCTCAGACTCGGCTATGGATGCATAGAGAGGTTCGGTGGTGAAGCCGAGGAAAGATACGCATCCCACCCCTA TGTAACCGGTTACATTGACGGCTATGAGGTGGACTTCGTCCCCTGTTACCGGATAGATGATGCATCCATGTTAAGGTCGG CCGTTGATCGGACCATACTCCACACAAGATATATACAGGAGAACCTCAGGGATGAGCAGAGAGATGATGTGCTCCTCCTT AAGCAGTTCATGAAGTCAACAGGGACCTACGGTTCAGAGTTCCGTGTTGGTGGCTTCGCAGGGTACCTTGCCGAGCTGCT GGTGCTCCGCTACGGCGACTTTGAGGGAGTCCTCGAGGGTGCCCTTCAGTGGAGGCCCGGATACATAATAGACCTTGAGG GCCACGGGACAGGTAAGGGATTCGAGGATCCCCTGGTGGTGGTTGACCCTGTTGATAGAAACAGAAACGTTGCAGCGGCC CTGACACTCCAGAGGATGGCTGAATTTGTAACCGCATCCCTGAACTTCCTGGGGAACCCGAGCCCAGAGTACTTTCAACC CCCCAGCTACTCCACAGATGCCGCTGAAATAACCGGGACCCTCAGCTGCAGGGGTTCCAGGGTCATCGTCATCTCAACGG GAGTCCCGGATGTACCCTCAGATGCCCTCTACCCCCAGCTGAGGAAGACCCTTGATTCTGTGGTTAAGAACCTTGAGGCG GAGGGTTTCTCTGTCCTGGGAGCTGACTACTGGAGTGATGAGAGCAAGTCAACATTTATGGTCCTTGAGATGGATGTATG GGAGCTCCCTTCATACCTGAAGAGGTATGGTCCCCCTGTATGGTCCCGACGCCACAGGGAGAGATTCCTCAGGAAGCATG AGAGGGTCTGGGTTGAGGGATCCAGGCTCACCATAGAATCCCCCAGGAGGCACAGATCCGCAGTTTCATATCTGAGGGAC CTGCTTTCAAAGCCGGATAGGCTGAGGATGGGTAAACATATAGGGGTGGAGATCAGGAGGGGCTTCAGTGTTGATCTCCT TGATGATGTAATCGGAGAAGCTGAAAAGGAATTTCTGGAGTTCATGGATGCATTCCTGAACCCCTGGAAGGCCCTTGAAA GATGA
Upstream 100 bases:
>100_bases TTCATGGCCCCCTATATGGATAGCTGGTGCACTCTCACTCCGGTTCCTATCCTGGATTAGTTTATCTGCAGTTTACTTCA ATTCTTCATGGTGATGATTT
Downstream 100 bases:
>100_bases TCCCATAACCCCCTACTATCTACTAACCCGGAAAGGCTATTCCCTCTCATCCACAAACCTGGGGACAGCGCTCTTAAGGG GGTCAAAGGTCTCAGGATTT
Product: tRNA CCA-pyrophosphorylase
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTTDYSNILKTIKPDGDEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTWLSGAADIDIFIHFPLTTPEDELK ESGLRLGYGCIERFGGEAEERYASHPYVTGYIDGYEVDFVPCYRIDDASMLRSAVDRTILHTRYIQENLRDEQRDDVLLL KQFMKSTGTYGSEFRVGGFAGYLAELLVLRYGDFEGVLEGALQWRPGYIIDLEGHGTGKGFEDPLVVVDPVDRNRNVAAA LTLQRMAEFVTASLNFLGNPSPEYFQPPSYSTDAAEITGTLSCRGSRVIVISTGVPDVPSDALYPQLRKTLDSVVKNLEA EGFSVLGADYWSDESKSTFMVLEMDVWELPSYLKRYGPPVWSRRHRERFLRKHERVWVEGSRLTIESPRRHRSAVSYLRD LLSKPDRLRMGKHIGVEIRRGFSVDLLDDVIGEAEKEFLEFMDAFLNPWKALER
Sequences:
>Translated_454_residues MTTDYSNILKTIKPDGDEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTWLSGAADIDIFIHFPLTTPEDELK ESGLRLGYGCIERFGGEAEERYASHPYVTGYIDGYEVDFVPCYRIDDASMLRSAVDRTILHTRYIQENLRDEQRDDVLLL KQFMKSTGTYGSEFRVGGFAGYLAELLVLRYGDFEGVLEGALQWRPGYIIDLEGHGTGKGFEDPLVVVDPVDRNRNVAAA LTLQRMAEFVTASLNFLGNPSPEYFQPPSYSTDAAEITGTLSCRGSRVIVISTGVPDVPSDALYPQLRKTLDSVVKNLEA EGFSVLGADYWSDESKSTFMVLEMDVWELPSYLKRYGPPVWSRRHRERFLRKHERVWVEGSRLTIESPRRHRSAVSYLRD LLSKPDRLRMGKHIGVEIRRGFSVDLLDDVIGEAEKEFLEFMDAFLNPWKALER >Mature_453_residues TTDYSNILKTIKPDGDEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTWLSGAADIDIFIHFPLTTPEDELKE SGLRLGYGCIERFGGEAEERYASHPYVTGYIDGYEVDFVPCYRIDDASMLRSAVDRTILHTRYIQENLRDEQRDDVLLLK QFMKSTGTYGSEFRVGGFAGYLAELLVLRYGDFEGVLEGALQWRPGYIIDLEGHGTGKGFEDPLVVVDPVDRNRNVAAAL TLQRMAEFVTASLNFLGNPSPEYFQPPSYSTDAAEITGTLSCRGSRVIVISTGVPDVPSDALYPQLRKTLDSVVKNLEAE GFSVLGADYWSDESKSTFMVLEMDVWELPSYLKRYGPPVWSRRHRERFLRKHERVWVEGSRLTIESPRRHRSAVSYLRDL LSKPDRLRMGKHIGVEIRRGFSVDLLDDVIGEAEKEFLEFMDAFLNPWKALER
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG1746
COG function: function code J; tRNA nucleotidyltransferase (CCA-adding enzyme)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CCA_METTH (O26684)
Other databases:
- EMBL: AE000666 - PIR: D69177 - RefSeq: NP_275727.1 - ProteinModelPortal: O26684 - SMR: O26684 - STRING: O26684 - GeneID: 1470545 - GenomeReviews: AE000666_GR - KEGG: mth:MTH584 - NMPDR: fig|187420.1.peg.582 - eggNOG: arNOG05007 - HOGENOM: HBG645243 - OMA: CEKIISA - ProtClustDB: PRK13300 - BioCyc: MTHE187420:MTH584-MONOMER - BRENDA: 2.7.7.21 - BRENDA: 2.7.7.25 - HAMAP: MF_01264 - InterPro: IPR008229 - InterPro: IPR002934 - InterPro: IPR011068 - InterPro: IPR015329 - PIRSF: PIRSF005335 - TIGRFAMs: TIGR03671
Pfam domain/function: PF01909 NTP_transf_2; PF09249 tRNA_NucTransf2; SSF55003 PAP_C
EC number: =2.7.7.21; =2.7.7.25
Molecular weight: Translated: 51346; Mature: 51214
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: BINDING 51-51 BINDING 54-54 BINDING 141-141 BINDING 161-161 BINDING 170-170
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDYSNILKTIKPDGDEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTWLSG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCC AADIDIFIHFPLTTPEDELKESGLRLGYGCIERFGGEAEERYASHPYVTGYIDGYEVDFV CCCEEEEEEECCCCCHHHHHHCCCEECHHHHHHHCCCHHHHHCCCCEEEEEECCEEEEEE PCYRIDDASMLRSAVDRTILHTRYIQENLRDEQRDDVLLLKQFMKSTGTYGSEFRVGGFA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCHHH GYLAELLVLRYGDFEGVLEGALQWRPGYIIDLEGHGTGKGFEDPLVVVDPVDRNRNVAAA HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHH LTLQRMAEFVTASLNFLGNPSPEYFQPPSYSTDAAEITGTLSCRGSRVIVISTGVPDVPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCC DALYPQLRKTLDSVVKNLEAEGFSVLGADYWSDESKSTFMVLEMDVWELPSYLKRYGPPV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCH WSRRHRERFLRKHERVWVEGSRLTIESPRRHRSAVSYLRDLLSKPDRLRMGKHIGVEIRR HHHHHHHHHHHHHHCEEEECCEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEC GFSVDLLDDVIGEAEKEFLEFMDAFLNPWKALER CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure TTDYSNILKTIKPDGDEYRRVMELSDSLVECLNGLAEEQGIDAEAVLVGSVAKGTWLSG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCC AADIDIFIHFPLTTPEDELKESGLRLGYGCIERFGGEAEERYASHPYVTGYIDGYEVDFV CCCEEEEEEECCCCCHHHHHHCCCEECHHHHHHHCCCHHHHHCCCCEEEEEECCEEEEEE PCYRIDDASMLRSAVDRTILHTRYIQENLRDEQRDDVLLLKQFMKSTGTYGSEFRVGGFA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCHHH GYLAELLVLRYGDFEGVLEGALQWRPGYIIDLEGHGTGKGFEDPLVVVDPVDRNRNVAAA HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHH LTLQRMAEFVTASLNFLGNPSPEYFQPPSYSTDAAEITGTLSCRGSRVIVISTGVPDVPS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCC DALYPQLRKTLDSVVKNLEAEGFSVLGADYWSDESKSTFMVLEMDVWELPSYLKRYGPPV HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCH WSRRHRERFLRKHERVWVEGSRLTIESPRRHRSAVSYLRDLLSKPDRLRMGKHIGVEIRR HHHHHHHHHHHHHHCEEEECCEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEC GFSVDLLDDVIGEAEKEFLEFMDAFLNPWKALER CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463