Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15678360

GI number: 15678360

Start: 267523

End: 268725

Strand: Direct

Name: Not Available

Synonym: MTH332

Alternate gene names: 15678360

Gene position: 267523-268725 (Clockwise)

Preceding gene: 15678359

Following gene: 15678361

Centisome position: 15.28

GC content: 37.91

Gene sequence:

>1203_bases
ATGTGGAGAGGAGGTCAAAACCCCTCCTTCAGATGGCTGGAGACACGTAGAGTACATGTTGAAGAGGAAGATCTGATGAG
AATAGCATTTGTTTATGATGGTGCCTATCCATGGATCAAGGGCGGTGTGGAAAAGAGGGTCTATGAGATTGGAAGAAGGC
TCGCTGAGAGGGGACATGATGTCCACTGGTACTGTGTGGGGTGGTGGCTGCCAGATAATGGGGAAAGAACCATTGAGATT
GATGGTATAAAATACCATGCAGTCTGTGAACCACTTGAAATATATGTGAATGGCAGAAGATCAATAAAGGCAGCCATCAA
ATTTTCCATAAGTCTAACAAGACCTCTTTTAAGGGAGAAATTTGATATCATAGACTGTCAGCAGTTTCCATATTTTTCAT
GTTTTTCTGCAAAATTGGCTTCATTAGTTAATAAATCCTCCCTCATCATAACAGTTCTGGAGTACTGGGGGGACTACTGG
TATGAGTATCTTGGCAAGGTTGGGATTTTTGGTAAAATCGTAGAGAGGTTGACTTTCAATTTAACATCAGATTACATAAC
TATATCCTCCCATGTTAGGAACTATCTGAGCTTTTGTAAGGATTCCATACACATTGTGCCTGATGGAGTTCCCTTCAATA
AAATAAGAAAAATTAAACCTTCTTCTGAGAAAGCAAATTTGATCTTTGTTGGACGTCTAATTAAGCACAAAAACGTGGAT
GTGCTCTTAAAGGCACTTCATTTACTCAGAGACGACGGATTTAAGCTAACGTGTATTATAATTGGTGATGGTCCTGAAAA
GGAAAACCTGATGAAAATCACGAGAGATCTTGGTCTTGAAGCCCAGGTCAAGTTCATGGGTAGAGTTCCCTCTGATGATG
AAGTATATAAGTATATGAAATCTTGTAATATCTTTGTTTTTCCATCTTCAAGAGAAGGGGCTGGTTTGGTCACCTTAGAA
GCAAATGCCGCTGGATTACCTGTGATAACAACTAACCATAAACTTAATGCTAGCCGAGAACTTATCAACGGAAAAAATGG
TGTTCTATTTAATCTAGATCCTCATGATCTGAAGGAAAAGATAATTTTAATAATGAATGAACATGAAAAATTAAGAAAAG
ACTGTATAAAATTCGCAGAGAGTTATAGCTGGGATAAAATTGCTGATTTAACTGAAAATGTTTATTTAGAGGTTTTAAAA
TGA

Upstream 100 bases:

>100_bases
TATAAAGGTATAAACTACAGGAAAGCACCTAAGATTCAAATTAGCCAATAGATTTCAAGAGAGCCTCTGAAAAACCTTAA
GATCATAATTACCTTCTCAA

Downstream 100 bases:

>100_bases
AGAGTGCTTTGATTACAGGAATAACTGGTCAGGATGGGGCTTATCTGGCAAAATTTCTCTTGGAAAAGGGCTATGAGGTT
TATGGAATTTACAGAAGGCT

Product: LPS biosynthesis RfbU related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MWRGGQNPSFRWLETRRVHVEEEDLMRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHDVHWYCVGWWLPDNGERTIEI
DGIKYHAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREKFDIIDCQQFPYFSCFSAKLASLVNKSSLIITVLEYWGDYW
YEYLGKVGIFGKIVERLTFNLTSDYITISSHVRNYLSFCKDSIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVD
VLLKALHLLRDDGFKLTCIIIGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMKSCNIFVFPSSREGAGLVTLE
ANAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEKIILIMNEHEKLRKDCIKFAESYSWDKIADLTENVYLEVLK

Sequences:

>Translated_400_residues
MWRGGQNPSFRWLETRRVHVEEEDLMRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHDVHWYCVGWWLPDNGERTIEI
DGIKYHAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREKFDIIDCQQFPYFSCFSAKLASLVNKSSLIITVLEYWGDYW
YEYLGKVGIFGKIVERLTFNLTSDYITISSHVRNYLSFCKDSIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVD
VLLKALHLLRDDGFKLTCIIIGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMKSCNIFVFPSSREGAGLVTLE
ANAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEKIILIMNEHEKLRKDCIKFAESYSWDKIADLTENVYLEVLK
>Mature_400_residues
MWRGGQNPSFRWLETRRVHVEEEDLMRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHDVHWYCVGWWLPDNGERTIEI
DGIKYHAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREKFDIIDCQQFPYFSCFSAKLASLVNKSSLIITVLEYWGDYW
YEYLGKVGIFGKIVERLTFNLTSDYITISSHVRNYLSFCKDSIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVD
VLLKALHLLRDDGFKLTCIIIGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMKSCNIFVFPSSREGAGLVTLE
ANAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEKIILIMNEHEKLRKDCIKFAESYSWDKIADLTENVYLEVLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 46161; Mature: 46161

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRGGQNPSFRWLETRRVHVEEEDLMRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHD
CCCCCCCCCEEEEEEEEEECCHHHHEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCC
VHWYCVGWWLPDNGERTIEIDGIKYHAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREK
EEEEEEEEEECCCCCEEEEECCEEEEEECCEEEEEECCCCEEEEEEEEEEEHHHHHHHHC
FDIIDCQQFPYFSCFSAKLASLVNKSSLIITVLEYWGDYWYEYLGKVGIFGKIVERLTFN
CCEECCCCCCCHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
LTSDYITISSHVRNYLSFCKDSIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVD
CCCCEEEEHHHHHHHHHHCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEEHHHCCCHH
VLLKALHLLRDDGFKLTCIIIGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMK
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
SCNIFVFPSSREGAGLVTLEANAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEK
HCEEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCCCEEEECCHHHCCCE
IILIMNEHEKLRKDCIKFAESYSWDKIADLTENVYLEVLK
EEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECC
>Mature Secondary Structure
MWRGGQNPSFRWLETRRVHVEEEDLMRIAFVYDGAYPWIKGGVEKRVYEIGRRLAERGHD
CCCCCCCCCEEEEEEEEEECCHHHHEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCC
VHWYCVGWWLPDNGERTIEIDGIKYHAVCEPLEIYVNGRRSIKAAIKFSISLTRPLLREK
EEEEEEEEEECCCCCEEEEECCEEEEEECCEEEEEECCCCEEEEEEEEEEEHHHHHHHHC
FDIIDCQQFPYFSCFSAKLASLVNKSSLIITVLEYWGDYWYEYLGKVGIFGKIVERLTFN
CCEECCCCCCCHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
LTSDYITISSHVRNYLSFCKDSIHIVPDGVPFNKIRKIKPSSEKANLIFVGRLIKHKNVD
CCCCEEEEHHHHHHHHHHCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEEHHHCCCHH
VLLKALHLLRDDGFKLTCIIIGDGPEKENLMKITRDLGLEAQVKFMGRVPSDDEVYKYMK
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
SCNIFVFPSSREGAGLVTLEANAAGLPVITTNHKLNASRELINGKNGVLFNLDPHDLKEK
HCEEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCCCEEEECCHHHCCCE
IILIMNEHEKLRKDCIKFAESYSWDKIADLTENVYLEVLK
EEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]