| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15678275
GI number: 15678275
Start: 191561
End: 192262
Strand: Direct
Name: Not Available
Synonym: MTH247
Alternate gene names: 15678275
Gene position: 191561-192262 (Clockwise)
Preceding gene: 15678274
Following gene: 15678276
Centisome position: 10.94
GC content: 58.4
Gene sequence:
>702_bases GTGATGAGGATAGGTGTCTCAACCCTTGCACTCACACCGTCCCCACTGGGGGAGATGCTGGAGTACATCGAGGCCCTTGG GGCCGAGTGCTGTGAAATCATATATGAGCACCCCCTCTCTGAGGTGGAGGTCACAGACTCCCACAGCCTGGAATTCACGG TACACGCCCCAATATCAGATATCAACATAGCGTCCCTCAATGACACTGTGAGGGAGGCCTCCATCAGGGAGGTTGAATCT GCAGTGGACCTTGCAGTTGAACTTGACTCCGACGTGGTGGTGGTCCACCCCGGCACAGTACCCTTCCTGGGGAGACCCTA CAGGGACCTTATAGCCGAGAGGAACCTGGAATCCCTTGCAGCAATATCAGAATACGCATCTGACAGGGGTGTCGGCGTAT ACCCTGAGAACATGCCCCGCCTGGAGGGGCCACTTCTCCGGGAACTTGAGGAGCTCTGGGGTGTTGCAGAGGAGCTCGGT GTCATGGTGACCCTTGACGCGGCCCACGCAGCCACCATGGGTTACTCCACGGAGGAGATGGTATCAGCCCATGTGGGGCA CGTCCACCTCTCTGACAACACGGGTGAGGTTGACAGTCACGACGCCCTGGGCGAGGGTTCACTGGACTTCCAGGCGCTCC TGGATGGTTTGAGGGGCGCAGGCTACACTGGAGTCCTCACAGTGGAGGTCAAGACACCTTGA
Upstream 100 bases:
>100_bases AAGCTCAGAAGGGACATAGAGCTGGCTGACATCATAATGGAGGCCGTGAAGAACAGCATACCTGTGAGGGCCAGGGTCAG GCCAGAGCGTTGAGGGTGGT
Downstream 100 bases:
>100_bases TGAGGTCAGACAGAGTGTTGAGTTCCTGAGGAATATTATACCTTGAGGGGCCCCGGGTCCCGTGATGCCCGGGAGGCCTT CCGTGTTCCTGGGGAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MMRIGVSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLSEVEVTDSHSLEFTVHAPISDINIASLNDTVREASIREVES AVDLAVELDSDVVVVHPGTVPFLGRPYRDLIAERNLESLAAISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELG VMVTLDAAHAATMGYSTEEMVSAHVGHVHLSDNTGEVDSHDALGEGSLDFQALLDGLRGAGYTGVLTVEVKTP
Sequences:
>Translated_233_residues MMRIGVSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLSEVEVTDSHSLEFTVHAPISDINIASLNDTVREASIREVES AVDLAVELDSDVVVVHPGTVPFLGRPYRDLIAERNLESLAAISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELG VMVTLDAAHAATMGYSTEEMVSAHVGHVHLSDNTGEVDSHDALGEGSLDFQALLDGLRGAGYTGVLTVEVKTP >Mature_233_residues MMRIGVSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLSEVEVTDSHSLEFTVHAPISDINIASLNDTVREASIREVES AVDLAVELDSDVVVVHPGTVPFLGRPYRDLIAERNLESLAAISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELG VMVTLDAAHAATMGYSTEEMVSAHVGHVHLSDNTGEVDSHDALGEGSLDFQALLDGLRGAGYTGVLTVEVKTP
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1614 and MJ0008 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 25067; Mature: 25067
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIGVSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLSEVEVTDSHSLEFTVHAPISD CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCC INIASLNDTVREASIREVESAVDLAVELDSDVVVVHPGTVPFLGRPYRDLIAERNLESLA CEEECCHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCHHHHH AISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELGVMVTLDAAHAATMGYSTEEM HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCEEEEECCHHHHHCCCCHHHH VSAHVGHVHLSDNTGEVDSHDALGEGSLDFQALLDGLRGAGYTGVLTVEVKTP HHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECC >Mature Secondary Structure MMRIGVSTLALTPSPLGEMLEYIEALGAECCEIIYEHPLSEVEVTDSHSLEFTVHAPISD CEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCC INIASLNDTVREASIREVESAVDLAVELDSDVVVVHPGTVPFLGRPYRDLIAERNLESLA CEEECCHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCHHHHH AISEYASDRGVGVYPENMPRLEGPLLRELEELWGVAEELGVMVTLDAAHAATMGYSTEEM HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCEEEEECCHHHHHCCCCHHHH VSAHVGHVHLSDNTGEVDSHDALGEGSLDFQALLDGLRGAGYTGVLTVEVKTP HHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]