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The map label for this gene is rpl19e

Identifier: 15678052

GI number: 15678052

Start: 10235

End: 10681

Strand: Direct

Name: rpl19e

Synonym: MTH21

Alternate gene names: 15678052

Gene position: 10235-10681 (Clockwise)

Preceding gene: 15678051

Following gene: 15678053

Centisome position: 0.58

GC content: 48.1

Gene sequence:

>447_bases
ATGAATCTTACTACTCAGAAGAGATTAGCTGCAGACATACTCAAGGTAGGGGTTAACAGGATATGGATAGACCCTGAAAG
GATCGATGAGGTTTCAAGGGCAATAACAAGGGACGGTGTGAAGCAGCTAATAAAGGATGGCGCAATAAAGGCCAAACCCA
AGAAGGGTATAAGCAGCTACAGGTCAAAGAAGATAGCCCAGCAGAAGAAGAAGGGACGAAGAAGGGGACCTGGAAGTATA
AAGGGTGCAAAGGGTGCCAGAAGGCCCAAAAAGGATGAGTGGATGACCACCATAAGGGCACTGAGAAAGGACCTCAAGGA
GATGAGGGACAACCGCGAAATAAACAAGAGCACCTACCGTAAACTGTACAAGATGGCCAAGGGCGGAGCCTTTAAGAGCA
AATCTTACATGAAGACCTATGCCCGGGACCACGACATGCTCAGGTAG

Upstream 100 bases:

>100_bases
GAAGGGGCATATTTTCCAGTCCAGCGAAAAAACTTTTTAAGGGGATACCTGAAATTTTTCGGGTTTATCAGCAAATGCTG
AATACAAGGAGGTTTCTTGA

Downstream 100 bases:

>100_bases
GAGGGATTTGATTGGCACATGGACCAAGATACAAGCTGGCATTTAGAAGAAGAAGGGAAGGTAAAACTGATTACCGGGCC
CGCTACAAAATGGTAGAAAC

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSI
KGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSKSYMKTYARDHDMLR

Sequences:

>Translated_148_residues
MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSI
KGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSKSYMKTYARDHDMLR
>Mature_148_residues
MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSI
KGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSKSYMKTYARDHDMLR

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family

Homologues:

Organism=Homo sapiens, GI4506609, Length=138, Percent_Identity=37.6811594202899, Blast_Score=87, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17508673, Length=122, Percent_Identity=38.5245901639344, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6319559, Length=133, Percent_Identity=41.3533834586466, Blast_Score=94, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6319444, Length=133, Percent_Identity=41.3533834586466, Blast_Score=94, Evalue=7e-21,
Organism=Drosophila melanogaster, GI45552831, Length=139, Percent_Identity=41.0071942446043, Blast_Score=109, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17136322, Length=139, Percent_Identity=41.0071942446043, Blast_Score=109, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL19_METTH (O26129)

Other databases:

- EMBL:   AE000666
- PIR:   G69125
- RefSeq:   NP_275166.1
- ProteinModelPortal:   O26129
- SMR:   O26129
- STRING:   O26129
- GeneID:   1469983
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH21
- NMPDR:   fig|187420.1.peg.21
- eggNOG:   arNOG08742
- HOGENOM:   HBG748852
- OMA:   MAKGGAF
- PhylomeDB:   O26129
- ProtClustDB:   PRK08570
- BioCyc:   MTHE187420:MTH21-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015974
- Gene3D:   G3DSA:1.10.1650.10
- Gene3D:   G3DSA:1.10.1200.60

Pfam domain/function: PF01280 Ribosomal_L19e; SSF48140 Ribosomal_L19/L19e

EC number: NA

Molecular weight: Translated: 17120; Mature: 17120

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSY
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLYKMAKGGAFKSKSYMKTYARDHDMLR
HHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSY
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLYKMAKGGAFKSKSYMKTYARDHDMLR
HHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463