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The map label for this gene is rpl32e

Identifier: 15678051

GI number: 15678051

Start: 9799

End: 10125

Strand: Direct

Name: rpl32e

Synonym: MTH20

Alternate gene names: 15678051

Gene position: 9799-10125 (Clockwise)

Preceding gene: 15678050

Following gene: 15678052

Centisome position: 0.56

GC content: 48.32

Gene sequence:

>327_bases
ATGAGGAAAAAATTTAAAAGACAGGAATACGCCCGATACAAGAAATTAGGGGAAAAATGGAGGAGACCAAGGGGCAGAAC
AAGCAAAATGAGGAGGTATGAAAAGGGTAAACCCGCTATGCCTGCAATAGGCTACAGGAAACCCAGTGAAGTTAGGGGTC
TCCACCCATCAGGATACGAGGATGTCCTGGTTTCCAACATGAGGGAACTTGAGGCACTGGACCCTGAAAAACAGGCTGCA
AGAATAGCTTCAGCTGTGGGGGCCAGGAAAAAAACCCTGATGCTTGAGAAGGCAAGGGAACTCGGCATCAAGGTTCTCAA
CCCGTAG

Upstream 100 bases:

>100_bases
ATGGCCAACATCGAACAGGCCACCAAAATCAAGGGAAGGGACCCAAGGGTTTTCCAGGACGGCATATACCTTGTGAGCAA
GGAATAGGGACGGTGATTCG

Downstream 100 bases:

>100_bases
GGAGGACTGGAAGGGGCATATTTTCCAGTCCAGCGAAAAAACTTTTTAAGGGGATACCTGAAATTTTTCGGGTTTATCAG
CAAATGCTGAATACAAGGAG

Product: 50S ribosomal protein L32e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MRKKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYEDVLVSNMRELEALDPEKQAA
RIASAVGARKKTLMLEKARELGIKVLNP

Sequences:

>Translated_108_residues
MRKKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYEDVLVSNMRELEALDPEKQAA
RIASAVGARKKTLMLEKARELGIKVLNP
>Mature_108_residues
MRKKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYEDVLVSNMRELEALDPEKQAA
RIASAVGARKKTLMLEKARELGIKVLNP

Specific function: Unknown

COG id: COG1717

COG function: function code J; Ribosomal protein L32E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32e family

Homologues:

Organism=Homo sapiens, GI4506635, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=3e-16,
Organism=Homo sapiens, GI55743130, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=3e-16,
Organism=Homo sapiens, GI55743128, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319378, Length=108, Percent_Identity=39.8148148148148, Blast_Score=86, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24651273, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=8e-17,
Organism=Drosophila melanogaster, GI221460572, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221460569, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17864106, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24651276, Length=108, Percent_Identity=37.962962962963, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_METTH (O26128)

Other databases:

- EMBL:   AE000666
- PIR:   D69124
- RefSeq:   NP_275165.1
- ProteinModelPortal:   O26128
- SMR:   O26128
- STRING:   O26128
- GeneID:   1469982
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH20
- NMPDR:   fig|187420.1.peg.20
- eggNOG:   arNOG11359
- HOGENOM:   HBG497568
- OMA:   FKGQYLM
- PhylomeDB:   O26128
- ProtClustDB:   PRK08562
- BioCyc:   MTHE187420:MTH20-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00810
- InterPro:   IPR001515
- InterPro:   IPR018263
- PANTHER:   PTHR23413:SF1
- ProDom:   PD003823

Pfam domain/function: PF01655 Ribosomal_L32e; SSF52042 Ribosomal_L32e

EC number: NA

Molecular weight: Translated: 12570; Mature: 12570

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS00580 RIBOSOMAL_L32E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHH
DVLVSNMRELEALDPEKQAARIASAVGARKKTLMLEKARELGIKVLNP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYE
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHH
DVLVSNMRELEALDPEKQAARIASAVGARKKTLMLEKARELGIKVLNP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463