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Identifier: 15646178

GI number: 15646178

Start: 1651704

End: 1652651

Strand: Reverse

Name: Not Available

Synonym: HP1571

Alternate gene names: 15646178

Gene position: 1652651-1651704 (Counterclockwise)

Preceding gene: 15646179

Following gene: 15646177

Centisome position: 99.09

GC content: 42.51

Gene sequence:

>948_bases
ATGGGTTTGGCGTTGGAAAAAGTTTGTTTTTTAGGCGTTATTTTTTTGATTAGCGCTTGCACGGTTAAAAAAGAGGGGGT
AAAGAATTTGTCTTACAAGCATGAAAGCTTGCGCGCTTATGAAAACGCTAAAGATTATGATCCGACAACCAAAAAAGCCG
CCTATAAACGCAATTTTTTTGAACGCCATTTCAAACGCTACTCCGATTCGCAAGATAGCAACACAAAAGATCAGCCACTA
GATAACGGCATGCGCGATTCTAGCTCGATCCAAAGAGCCACCATGCGCCCTTATCAAGTGGGGGGCAAGTGGTATTACCC
CACTAAAGTGGATTTAGGCGAAAAATTTGATGGCGTTGCGAGTTGGTATGGCCCTAACTTCCATGCCAAAAAAACCAGTA
ATGGGGAAATTTATAACATGTATGCCCACACCGCCGCGCACAAAACTTTACCCATGAACACCGTGGTGAAAGTCATCAAT
GTTGATAATAACTTAAGCACCATTGTGCGCATCAACGATAGAGGGCCTTTTGTGAGCGATCGCATCATTGATTTGTCTAA
TGCGGCCGCTAGGGATATTGACATGGTTAAAAAAGGCACAGCCAGCGTGCGTCTCATTGTTTTGGGCTTTGGTGGGGTTA
TCTCCACGCAATACGAACAATCCTTTAACGCCAGCTCTTCAAAGATCTTGCACAAGGAATTTAAAGTCGGCGAGAGCGAA
AAAAGCGTGAGCGGAGGGAAATTTTCTTTGCAAATGGGGGCTTTTAGAAACCAAATAGGTGCTCAAACTTTAGCGGATAA
ATTGCAAGCAGAAAATCCAAATTACAGCGTCAAGGTTGCTTTTAAAGACGATTTGTATAAAGTTTTAGTTCAAGGGTTTC
AAAGCGAAGAAGAGGCTAGGGATTTTATGAAAAAATACAACCAGAATGCGGTTTTAACGAGAGAATGA

Upstream 100 bases:

>100_bases
ATATCCAATTAGCCAATGATCTCAAAGATTCTAATATTTTTATCCACCAGCGTTTAATCATCCCCACCAACAAAAAATTA
CTCGCTACAAGGGAATTTTA

Downstream 100 bases:

>100_bases
TTAAGTTATTGCTTTTAGATGTGGATGGCACGCTCACAGACGGATCGTTGTATTTTGATGAAAATTTTCACGAAATCAAG
GCTTTTAATGTCAAAGACGG

Product: rare lipoprotein A (rlpA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MGLALEKVCFLGVIFLISACTVKKEGVKNLSYKHESLRAYENAKDYDPTTKKAAYKRNFFERHFKRYSDSQDSNTKDQPL
DNGMRDSSSIQRATMRPYQVGGKWYYPTKVDLGEKFDGVASWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVIN
VDNNLSTIVRINDRGPFVSDRIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISTQYEQSFNASSSKILHKEFKVGESE
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEARDFMKKYNQNAVLTRE

Sequences:

>Translated_315_residues
MGLALEKVCFLGVIFLISACTVKKEGVKNLSYKHESLRAYENAKDYDPTTKKAAYKRNFFERHFKRYSDSQDSNTKDQPL
DNGMRDSSSIQRATMRPYQVGGKWYYPTKVDLGEKFDGVASWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVIN
VDNNLSTIVRINDRGPFVSDRIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISTQYEQSFNASSSKILHKEFKVGESE
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEARDFMKKYNQNAVLTRE
>Mature_314_residues
GLALEKVCFLGVIFLISACTVKKEGVKNLSYKHESLRAYENAKDYDPTTKKAAYKRNFFERHFKRYSDSQDSNTKDQPLD
NGMRDSSSIQRATMRPYQVGGKWYYPTKVDLGEKFDGVASWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVINV
DNNLSTIVRINDRGPFVSDRIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISTQYEQSFNASSSKILHKEFKVGESEK
SVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEARDFMKKYNQNAVLTRE

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family

Homologues:

Organism=Escherichia coli, GI1786852, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLPA_HELPY (O26091)

Other databases:

- EMBL:   AE000511
- PIR:   C64716
- RefSeq:   NP_208362.1
- ProteinModelPortal:   O26091
- SMR:   O26091
- DIP:   DIP-3473N
- MINT:   MINT-159865
- GeneID:   899720
- GenomeReviews:   AE000511_GR
- KEGG:   hpy:HP1571
- NMPDR:   fig|85962.1.peg.1557
- TIGR:   HP_1571
- HOGENOM:   HBG701137
- OMA:   YENAKDY
- ProtClustDB:   CLSK496576
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730
- Gene3D:   G3DSA:3.30.70.1070
- TIGRFAMs:   TIGR00413

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR; SSF50685 Barwin_like; SSF110997 Spore_cell-division_bac

EC number: NA

Molecular weight: Translated: 35477; Mature: 35345

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLALEKVCFLGVIFLISACTVKKEGVKNLSYKHESLRAYENAKDYDPTTKKAAYKRNFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ERHFKRYSDSQDSNTKDQPLDNGMRDSSSIQRATMRPYQVGGKWYYPTKVDLGEKFDGVA
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEECCCCCCCCCCCCCHH
SWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVINVDNNLSTIVRINDRGPFVSD
HHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCC
RIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISTQYEQSFNASSSKILHKEFKVGESE
CEEECCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEAR
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHH
DFMKKYNQNAVLTRE
HHHHHHCCCCEEECC
>Mature Secondary Structure 
GLALEKVCFLGVIFLISACTVKKEGVKNLSYKHESLRAYENAKDYDPTTKKAAYKRNFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ERHFKRYSDSQDSNTKDQPLDNGMRDSSSIQRATMRPYQVGGKWYYPTKVDLGEKFDGVA
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEECCCCCCCCCCCCCHH
SWYGPNFHAKKTSNGEIYNMYAHTAAHKTLPMNTVVKVINVDNNLSTIVRINDRGPFVSD
HHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCC
RIIDLSNAAARDIDMVKKGTASVRLIVLGFGGVISTQYEQSFNASSSKILHKEFKVGESE
CEEECCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC
KSVSGGKFSLQMGAFRNQIGAQTLADKLQAENPNYSVKVAFKDDLYKVLVQGFQSEEEAR
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHH
DFMKKYNQNAVLTRE
HHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185