Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15646080

GI number: 15646080

Start: 1543443

End: 1544636

Strand: Reverse

Name: Not Available

Synonym: HP1471

Alternate gene names: NA

Gene position: 1544636-1543443 (Counterclockwise)

Preceding gene: 15646081

Following gene: 15646079

Centisome position: 92.61

GC content: 37.86

Gene sequence:

>1194_bases
GTGTTGTCAAGTAAGAAAATTTATCATGCCAACACGATAAAAATCCATGACACGCAAATAGAAAACAGCTACCCTTATGT
CGTGCGCGCTGCAACCAATAATGGTATAAAAGGCTTTATTATAGATGACCCTACATTTGCTAATAAAAAAAATACCCTTT
CGTTCGCGCAAGACACTTTCACTGTGTTTTATCAAAAACAACCTTATTTTACAGGCAATAAGGTTAAAATTTTAAAACCA
AAATTTGCTTTCAAAAGCCCTAAAATTTTACATTCTATAAGCGCGATTTTACAATTTATTTTAAAACCCTTAACTTGGGG
GCTAGGCTCTACAACAGAAAGCATTGCGGAGTTTAAATTTTCTCTACCCCTAAAACCCACCGCTAACGCTCAAACCCTTG
AGGATATTGATTTTGATTTCATGGAAAAATTCATAGCCGAACTTGAGCAGTGTCGGCTCGCCGAACTTGAGCAGTGTCGG
CTCGCCGAACTTCAGGCTTATTTAAAAGCTACAGGGCTAGAAAACACCACCCTTTCTAACGATGAAGAAAACGCCCTTAA
TGTTTTCAATAATTCTGGGGGGGGGGGGGGTAATACCCCATGCGGCTTAACATGGCAAAGCTTTAGATTAGGGGATTTGT
TTGAAATTGAAAAAACCTTAAGCTTTAATAAAGACGCTTTAACGCAAGGAGAAGATTATGATTATATTACAAGGACTTCG
CAAAATCAAGGCGTTTTGCAAACTACAGGATTTGTCAATGCAGAAAATTTAAACCCACCATTTACTTGGAGTTTAGGGCT
TTTGCAAATGGATTTTTTCTATCGTAAAAAGTCATGGTATGCGGGACAATTCATGCGAAAAATCACACCAAAAACTGAAA
TTGAAAATAAAATTGATTTACGCATAGCCAACTACTTCACAACGCTTTTAAACGCCTTAAAACGCCCTTTATTAAGCGTA
TTGGTTAGAGATATTGATAAAACTTTTAGGGAGCAAAAAATCCAACTACCCCTAAAACCCACCGCTAAAACTCAAACCCT
TGATGGTATTGATTTTGATTTCATGCACACCCTTATCAACGCCCTAATGAAGCAAACCATTCAAGGCGTGGCTCAATACT
GCGACGCTAAAATACAAGCTACAAAAGAGGTTATCAGCCAAGAAGCGCCCGTTCAAAAAGACTCGTTATTTTAA

Upstream 100 bases:

>100_bases
TGATTTTAAAAAACCAAATGCCCCCAAAGCGATAGGCCCCCTTAATAGCCAACTCAACGCTATTAAGTGGGGCGAGTTCA
GATTGGGGGATTTGTTTGAA

Downstream 100 bases:

>100_bases
AAGGGGTTTTAAGCGCGCTAGCTTGTGTTACAATAAACTTAAAATTCGCTTGATTGAAGAGGGTTGAATGATGGAGCAGC
CAGTCATTAAAGAAGGGACT

Product: type IIS restriction enzyme R protein (BCGIB)

Products: NA

Alternate protein names: Type II Restriction Methyltransferase; Type IIS Restriction Protein; Type IIS Restriction R Protein; Type IIS R-M System Restriction; Restriction Beta Subunit

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLSSKKIYHANTIKIHDTQIENSYPYVVRAATNNGIKGFIIDDPTFANKKNTLSFAQDTFTVFYQKQPYFTGNKVKILKP
KFAFKSPKILHSISAILQFILKPLTWGLGSTTESIAEFKFSLPLKPTANAQTLEDIDFDFMEKFIAELEQCRLAELEQCR
LAELQAYLKATGLENTTLSNDEENALNVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTS
QNQGVLQTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDLRIANYFTTLLNALKRPLLSV
LVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLINALMKQTIQGVAQYCDAKIQATKEVISQEAPVQKDSLF

Sequences:

>Translated_397_residues
MLSSKKIYHANTIKIHDTQIENSYPYVVRAATNNGIKGFIIDDPTFANKKNTLSFAQDTFTVFYQKQPYFTGNKVKILKP
KFAFKSPKILHSISAILQFILKPLTWGLGSTTESIAEFKFSLPLKPTANAQTLEDIDFDFMEKFIAELEQCRLAELEQCR
LAELQAYLKATGLENTTLSNDEENALNVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTS
QNQGVLQTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDLRIANYFTTLLNALKRPLLSV
LVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLINALMKQTIQGVAQYCDAKIQATKEVISQEAPVQKDSLF
>Mature_397_residues
MLSSKKIYHANTIKIHDTQIENSYPYVVRAATNNGIKGFIIDDPTFANKKNTLSFAQDTFTVFYQKQPYFTGNKVKILKP
KFAFKSPKILHSISAILQFILKPLTWGLGSTTESIAEFKFSLPLKPTANAQTLEDIDFDFMEKFIAELEQCRLAELEQCR
LAELQAYLKATGLENTTLSNDEENALNVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTS
QNQGVLQTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDLRIANYFTTLLNALKRPLLSV
LVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLINALMKQTIQGVAQYCDAKIQATKEVISQEAPVQKDSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45085; Mature: 45085

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSKKIYHANTIKIHDTQIENSYPYVVRAATNNGIKGFIIDDPTFANKKNTLSFAQDTF
CCCCCEEEECEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHCCEE
TVFYQKQPYFTGNKVKILKPKFAFKSPKILHSISAILQFILKPLTWGLGSTTESIAEFKF
EEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEE
SLPLKPTANAQTLEDIDFDFMEKFIAELEQCRLAELEQCRLAELQAYLKATGLENTTLSN
ECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEENALNVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTS
CCCCHHHEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCHHCCCCCCCCCEECCC
QNQGVLQTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDL
CCCCEEEECCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHH
RIANYFTTLLNALKRPLLSVLVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
ALMKQTIQGVAQYCDAKIQATKEVISQEAPVQKDSLF
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSSKKIYHANTIKIHDTQIENSYPYVVRAATNNGIKGFIIDDPTFANKKNTLSFAQDTF
CCCCCEEEECEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHCCEE
TVFYQKQPYFTGNKVKILKPKFAFKSPKILHSISAILQFILKPLTWGLGSTTESIAEFKF
EEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEE
SLPLKPTANAQTLEDIDFDFMEKFIAELEQCRLAELEQCRLAELQAYLKATGLENTTLSN
ECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEENALNVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTS
CCCCHHHEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCHHCCCCCCCCCEECCC
QNQGVLQTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDL
CCCCEEEECCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHH
RIANYFTTLLNALKRPLLSVLVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
ALMKQTIQGVAQYCDAKIQATKEVISQEAPVQKDSLF
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA