| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646081
GI number: 15646081
Start: 1544702
End: 1546741
Strand: Reverse
Name: Not Available
Synonym: HP1472
Alternate gene names: 15646081
Gene position: 1546741-1544702 (Counterclockwise)
Preceding gene: 15646082
Following gene: 15646080
Centisome position: 92.74
GC content: 38.73
Gene sequence:
>2040_bases ATGAATAAAGTTCAATCTATTGATCCTTTAATCGCTGATAAGTTCAACAACGAGTTAAGAAGTTATAACCTAGAATACAA ACTAGAGCAAGAAAGCCTGAATAAAGAAATTGATGAAGCTTTAAAAAATTACGCTTCTAAAAATGGGGGTTTAGGGGGTA ACCGCCCTGATGTGAAACTTTTATTAAACACACAAGACCCCAACAGAAGAGTCCCTATTTTAATAGAATACAAAGGGCTA AAAGATAAGCTCATTAAATTAGACAAAAACAAACTGGTAGAAAACTTTAAAAACCATGAGCCTCATTATAAAAACATTAG AGAATACGCCCTAAATGGGGCTTTGCATTACGCTAATGCGATTTTACACCACACGAGCTACACTGAATGCATCGCCATAG GCATTACAGGCTATAAAGACAATAAGGGCGGCATATGCTCTCAAATCGCTGTCTATTATGTGAATAAAAGCAATCTAGGC ATGGGGATAGATGTTTCAAAAGGCGAGCAAGGTTATAGCGATCTCTCCTTTTTAAGCCGTAAGCATTTTAACGACTTTAT TAAACGAGTAGACACCCTTTCTTTAAGCGATGAAGATTTAGAGCGCATTAGAGAAAAGAAAAACCAAGAAATAGAAGACT GCTTAATGCGGCTCAACAACAATATTTACAACAAAGAAAAGAATTTTTTAAGCGAACACAATCGGGTATATTTAGTGATT GCGAGCATTATCGCTAATTTAGGCATCCCTAATTTGGTAACCCCCCTAAACAAAGAAGATCTAAAATCCAGCGATGAGGT CCATCAAAGAGATGGCGACATCATGCTCAGAAAAATCCAATCCTTTTTAGAGAATAAGGATTTGTCTCCAGAGAAAAGGC AAAGCATTATTTCTTCATTAGAGACTTTATTAAGAAACGAAAACAACAACAAAGCCACTAATGGCGAAAGCTGTTTGAAG CGTTGTTTTAGTGAGATTGTGGATAGTTTGGGCATTTATTATAAAATCGGTCTTAGCACGGATTTTACCGGTAAATTGTT CAATGAAATGTATCGCTGGCTGGGTTTCACGAAAGACCAATTAAACGATGTGGTGCTCACACCCCCTTATGTCGCCACGC TTTTAGCTAGACTTTCTAAAGTCAATAAGGATAGTTTCGTGTGGGATTTTGCCACCGGAAGCGCTGGGCTATTAGTCGCA AGCATGAATTTGATGATAGAAGACGCTAAAAAGCGTATCACTAGTCCAGAGGAATTAGAGCAAAAAATCGCCCACATTAA AGCCAAGCAACTTTTAGGGATAGAAATCTTATCGGATATCCATACTTTAGCGGTGTTAAACATGATTTTAATGGGCGATG GGAGCAGTCAAATCTTAAACCAAGACGGCTTGAGCGGTTTTGATGGCAAAGTCAATAACGAAGCGTTTAAGGCTAATGCC TTTGTTTTAAACCCGCCTTATTCCGCTAGCGGTAATGGCATGGTGTTTGTGGAGCAGGCTTTAGAAAAAATGCAAAGCGG TTATGCGAGCGTGATCATCCAATCAAGCGCCGGCAGTGGTAAAGCCAAAGAATACAATGTAAGGATTTTGGAAAAACACA CGCTTTTAGCGAGCATTAAAATGCCTTTAGATTTATTCATCGGTAAAAGCAGCGTTCAAACCCATATCTATGTTTTTAGG GTCAATGAAAAGCATGACGCTAAGCAAAGGGTGAAATTTATTAATTTCAGTAACGACGGCTACGCTAGAGCGAATCGCAA AAAAGCCAAAGCCAGCCACAATTTAAAAGACACGCATAACGCCAAAGAGCGCTACAACGAAGTCGTGGATTTAGTCCATA TTGGCCAATCATGTTTGAAATTTCTAAGCGAAGATGACTATTATGAAAACACCATAGATCCCAAAAACGGGAGCGATTGG AACCAAAACAAACCCACTGACACCAAACCCGAATTAGAGGATTTTAAAAGAACGATAGCCGATTACCTTTCTTATGAAGT AAGCTTGATTTTAAAAAACCAAATGCCCCCAAAGCGATAG
Upstream 100 bases:
>100_bases CCTAAAATACCTTAAAACCCTAAACATAAAAGTACACTTTGCGATCGCGCTTTGCAGCGCGGATGAATGAGTTATAATTT TATTTTTTAAAAGGATACCC
Downstream 100 bases:
>100_bases GCCCCCTTAATAGCCAACTCAACGCTATTAAGTGGGGCGAGTTCAGATTGGGGGATTTGTTTGAAGTGTTGTCAAGTAAG AAAATTTATCATGCCAACAC
Product: type IIS restriction enzyme M protein (mod)
Products: NA
Alternate protein names: Adenine-specific methyltransferase activity [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MNKVQSIDPLIADKFNNELRSYNLEYKLEQESLNKEIDEALKNYASKNGGLGGNRPDVKLLLNTQDPNRRVPILIEYKGL KDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANAILHHTSYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLG MGIDVSKGEQGYSDLSFLSRKHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLMRLNNNIYNKEKNFLSEHNRVYLVI ASIIANLGIPNLVTPLNKEDLKSSDEVHQRDGDIMLRKIQSFLENKDLSPEKRQSIISSLETLLRNENNNKATNGESCLK RCFSEIVDSLGIYYKIGLSTDFTGKLFNEMYRWLGFTKDQLNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVA SMNLMIEDAKKRITSPEELEQKIAHIKAKQLLGIEILSDIHTLAVLNMILMGDGSSQILNQDGLSGFDGKVNNEAFKANA FVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIKMPLDLFIGKSSVQTHIYVFR VNEKHDAKQRVKFINFSNDGYARANRKKAKASHNLKDTHNAKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDW NQNKPTDTKPELEDFKRTIADYLSYEVSLILKNQMPPKR
Sequences:
>Translated_679_residues MNKVQSIDPLIADKFNNELRSYNLEYKLEQESLNKEIDEALKNYASKNGGLGGNRPDVKLLLNTQDPNRRVPILIEYKGL KDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANAILHHTSYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLG MGIDVSKGEQGYSDLSFLSRKHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLMRLNNNIYNKEKNFLSEHNRVYLVI ASIIANLGIPNLVTPLNKEDLKSSDEVHQRDGDIMLRKIQSFLENKDLSPEKRQSIISSLETLLRNENNNKATNGESCLK RCFSEIVDSLGIYYKIGLSTDFTGKLFNEMYRWLGFTKDQLNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVA SMNLMIEDAKKRITSPEELEQKIAHIKAKQLLGIEILSDIHTLAVLNMILMGDGSSQILNQDGLSGFDGKVNNEAFKANA FVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIKMPLDLFIGKSSVQTHIYVFR VNEKHDAKQRVKFINFSNDGYARANRKKAKASHNLKDTHNAKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDW NQNKPTDTKPELEDFKRTIADYLSYEVSLILKNQMPPKR >Mature_679_residues MNKVQSIDPLIADKFNNELRSYNLEYKLEQESLNKEIDEALKNYASKNGGLGGNRPDVKLLLNTQDPNRRVPILIEYKGL KDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANAILHHTSYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLG MGIDVSKGEQGYSDLSFLSRKHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLMRLNNNIYNKEKNFLSEHNRVYLVI ASIIANLGIPNLVTPLNKEDLKSSDEVHQRDGDIMLRKIQSFLENKDLSPEKRQSIISSLETLLRNENNNKATNGESCLK RCFSEIVDSLGIYYKIGLSTDFTGKLFNEMYRWLGFTKDQLNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVA SMNLMIEDAKKRITSPEELEQKIAHIKAKQLLGIEILSDIHTLAVLNMILMGDGSSQILNQDGLSGFDGKVNNEAFKANA FVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIKMPLDLFIGKSSVQTHIYVFR VNEKHDAKQRVKFINFSNDGYARANRKKAKASHNLKDTHNAKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDW NQNKPTDTKPELEDFKRTIADYLSYEVSLILKNQMPPKR
Specific function: Recognizes the double-stranded sequence 5'-CGAN(6)TGC-3' and cleaves bilaterally and symmetrically outside the sequence to release a 34-base pair fragment. Methylation of the recognition sequence occurs on the adenine in either one or both strands [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 77051; Mature: 77051
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVQSIDPLIADKFNNELRSYNLEYKLEQESLNKEIDEALKNYASKNGGLGGNRPDVKL CCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LLNTQDPNRRVPILIEYKGLKDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANA EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILHHTSYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLGMGIDVSKGEQGYSDLSFLSR HHHCCCCCEEEEEEEECCCCCCCCHHEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHH KHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLMRLNNNIYNKEKNFLSEHNRVYLVI HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEEH ASIIANLGIPNLVTPLNKEDLKSSDEVHQRDGDIMLRKIQSFLENKDLSPEKRQSIISSL HHHHHHCCCCHHCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ETLLRNENNNKATNGESCLKRCFSEIVDSLGIYYKIGLSTDFTGKLFNEMYRWLGFTKDQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHH LNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVASMNLMIEDAKKRITSPEELE CCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH QKIAHIKAKQLLGIEILSDIHTLAVLNMILMGDGSSQILNQDGLSGFDGKVNNEAFKANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECCE FVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIK EEECCCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHC MPLDLFIGKSSVQTHIYVFRVNEKHDAKQRVKFINFSNDGYARANRKKAKASHNLKDTHN CCHHHEECCCCCEEEEEEEEECCCCCHHHHEEEEEECCCCCCCCCHHHHHHCCCCCHHHH AKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDWNQNKPTDTKPELEDFKRTIA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH DYLSYEVSLILKNQMPPKR HHHHHHHHEEEECCCCCCC >Mature Secondary Structure MNKVQSIDPLIADKFNNELRSYNLEYKLEQESLNKEIDEALKNYASKNGGLGGNRPDVKL CCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LLNTQDPNRRVPILIEYKGLKDKLIKLDKNKLVENFKNHEPHYKNIREYALNGALHYANA EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILHHTSYTECIAIGITGYKDNKGGICSQIAVYYVNKSNLGMGIDVSKGEQGYSDLSFLSR HHHCCCCCEEEEEEEECCCCCCCCHHEEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHH KHFNDFIKRVDTLSLSDEDLERIREKKNQEIEDCLMRLNNNIYNKEKNFLSEHNRVYLVI HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEEH ASIIANLGIPNLVTPLNKEDLKSSDEVHQRDGDIMLRKIQSFLENKDLSPEKRQSIISSL HHHHHHCCCCHHCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ETLLRNENNNKATNGESCLKRCFSEIVDSLGIYYKIGLSTDFTGKLFNEMYRWLGFTKDQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHH LNDVVLTPPYVATLLARLSKVNKDSFVWDFATGSAGLLVASMNLMIEDAKKRITSPEELE CCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHH QKIAHIKAKQLLGIEILSDIHTLAVLNMILMGDGSSQILNQDGLSGFDGKVNNEAFKANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEECCE FVLNPPYSASGNGMVFVEQALEKMQSGYASVIIQSSAGSGKAKEYNVRILEKHTLLASIK EEECCCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHC MPLDLFIGKSSVQTHIYVFRVNEKHDAKQRVKFINFSNDGYARANRKKAKASHNLKDTHN CCHHHEECCCCCEEEEEEEEECCCCCHHHHEEEEEECCCCCCCCCHHHHHHCCCCCHHHH AKERYNEVVDLVHIGQSCLKFLSEDDYYENTIDPKNGSDWNQNKPTDTKPELEDFKRTIA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH DYLSYEVSLILKNQMPPKR HHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8451198; 8276869 [H]