Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15645975

GI number: 15645975

Start: 1424392

End: 1425792

Strand: Reverse

Name: Not Available

Synonym: HP1363

Alternate gene names: 15645975

Gene position: 1425792-1424392 (Counterclockwise)

Preceding gene: 15645976

Following gene: 15645974

Centisome position: 85.49

GC content: 40.33

Gene sequence:

>1401_bases
ATGCTTTCAGTGTATGAAAAAGTGAATGCTCTAGACAAAAGGGCGATTGAAGAATTGTTTTTAAGCGAAGACATTTTAAT
GGAAAACGCCGCTATGGCTTTAGAAAGGGCGGTTTTACAAAACGCTTCTTTAGGCGCTAAAGTCATTATCCTTTGTGGGA
GCGGGGATAATGGGGGCGATGGCTATGCTCTAGCTAGGCGTTTAGTGGGGCGTTTTAAAACGCTAGTCTTTGAAATGAAA
TTAGCCAAAAGCCCCATGTGCCAATTGCAACAAGAAAGGGCTAAAAAAGCAGGGGTAGTCATCAAAGCATACGAAGAAAA
CGCCCTTAATCAAAATTTAGAATGCGATGTTTTAATAGACTGCGTGATAGGGAGTCATTTTAAAGGCAAATTAGAGCCGT
TTTTAAACTTTGAAAGCCTTTCTCAAAAAGCGCGCTTTAAAATCGCTTGCGATATTCCTAGCGGGATCGATTCTAAAGGC
AGGGTGGATAAGGGAGCGTTTAAAGCGGATTTGACTATCAGCATGGGTGCTATTAAGTCATGCTTATTAAGCGATAGGGC
TAAAGACTATGTAGGGGAATTGAAAGTGGGGCATTTGGGGGTTTTTAATCAAATTTATGAGATCCCAACGGACACTTTTT
TACTAGAAAAAAGCGATTTGAAACTGCCCTTAAGGGATAGAAAAAACGCTCATAAGGGCGATTACGGGCATGCACATGTT
CTTTTGGGTAAGCATAGTGGGGCGGGGTTATTGAGCGCTTTAAGCGCGTTAAGTTTTGGATCTGGAGTGGTGAGCGTTCA
AGCGTTAGAATGCGAGATAACTTCTAATAACAAACCTTTAGAATTGGTTTTTTGTGAAAATTTCCCTAACTTATTGAGCG
CGTTCGCTCTTGGCATGGGGTTAGAAAATATTCCAAAGGATTTTAACAAGTGGCTTGAATTAGCCCCATGCGTTTTAGAT
GCGGGTGTTTTTTATCATAAAGAGGTGTTACAAGCCTTAGAAAAAGAAGTGATCTTAACCCCTCACCCTAAAGAGTTTTT
ATCGTTATTAAAATTAGTGGGGATCAATATAAGCATGCTAGAATTGTTAGACAATAAACTAGAGATCGCAAGGGATTTTT
CTCAAAAATACCCCAAGGTGGTTTTGCTTTTAAAAGGGGCTAATACCCTAATCGCTCATCAAGGGCAAGTTTTTATCAAC
ATTTTAGGGAGCGTGGCTTTAGCCAAAGCAGGCAGTGGCGATGTGTTAGCGGGGCTTATTTTAAGCTTGCTTTCTCAAAA
TTACACGCCTTTAGACGCCGCTATTAACGCAAGTTCAGCACACGCTCTAGCGAGTTTAGAATTTAAGAACAATTACGCTT
TAACGCCCCTAGATTTGATAGAAAAGATCAAACAATTATAA

Upstream 100 bases:

>100_bases
TGTGCGAAAAGTATAAAATGCGTTTAGAAATTCATAGCGAACCCTCTTTAAAGGGATCGTTTTATGAAAATTCGTTTTGC
GTTCAATTTCAAGGATAAAG

Downstream 100 bases:

>100_bases
AAGGATAAAAATGGATCATTTAAAGCATTTGCAGCAATTGCAAAACATTGAAAGGATCGTGCTTTCAGGCATTGTGTTGG
CCAATCATAAGATTGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLVFEMK
LAKSPMCQLQQERAKKAGVVIKAYEENALNQNLECDVLIDCVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKG
RVDKGAFKADLTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHV
LLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMGLENIPKDFNKWLELAPCVLD
AGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFIN
ILGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASSAHALASLEFKNNYALTPLDLIEKIKQL

Sequences:

>Translated_466_residues
MLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLVFEMK
LAKSPMCQLQQERAKKAGVVIKAYEENALNQNLECDVLIDCVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKG
RVDKGAFKADLTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHV
LLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMGLENIPKDFNKWLELAPCVLD
AGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFIN
ILGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASSAHALASLEFKNNYALTPLDLIEKIKQL
>Mature_466_residues
MLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLVFEMK
LAKSPMCQLQQERAKKAGVVIKAYEENALNQNLECDVLIDCVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKG
RVDKGAFKADLTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHV
LLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMGLENIPKDFNKWLELAPCVLD
AGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFIN
ILGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASSAHALASLEFKNNYALTPLDLIEKIKQL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain

Homologues:

Organism=Escherichia coli, GI1790609, Length=436, Percent_Identity=29.3577981651376, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1363_HELPY (P56176)

Other databases:

- EMBL:   AE000511
- PIR:   C64690
- RefSeq:   NP_208155.1
- PDB:   3K5W
- PDBsum:   3K5W
- ProteinModelPortal:   P56176
- GeneID:   900323
- GenomeReviews:   AE000511_GR
- KEGG:   hpy:HP1363
- NMPDR:   fig|85962.1.peg.1351
- TIGR:   HP_1363
- HOGENOM:   HBG662407
- OMA:   MALERAV
- ProtClustDB:   CLSK872545
- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443
- TIGRFAMs:   TIGR00196
- TIGRFAMs:   TIGR00197

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N; SSF64153 YjeF_N

EC number: NA

Molecular weight: Translated: 50738; Mature: 50738

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01049 YJEF_C_1; PS01050 YJEF_C_2; PS51383 YJEF_C_3; PS51385 YJEF_N

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GYALARRLVGRFKTLVFEMKLAKSPMCQLQQERAKKAGVVIKAYEENALNQNLECDVLID
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEE
CVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKGRVDKGAFKADLTISMGAIKS
EHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHH
CLLSDRAKDYVGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHV
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCEEE
LLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMG
EEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCC
LENIPKDFNKWLELAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISML
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCHHHH
ELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAKAGSGDVLAGLI
HHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHH
LSLLSQNYTPLDAAINASSAHALASLEFKNNYALTPLDLIEKIKQL
HHHHCCCCCCHHHHCCCCCCHHEEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GYALARRLVGRFKTLVFEMKLAKSPMCQLQQERAKKAGVVIKAYEENALNQNLECDVLID
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEE
CVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKGRVDKGAFKADLTISMGAIKS
EHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHH
CLLSDRAKDYVGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHV
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCEEE
LLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMG
EEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHCC
LENIPKDFNKWLELAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISML
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCHHHH
ELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAKAGSGDVLAGLI
HHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHH
LSLLSQNYTPLDAAINASSAHALASLEFKNNYALTPLDLIEKIKQL
HHHHCCCCCCHHHHCCCCCCHHEEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185