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The map label for this gene is gatA

Identifier: 15645449

GI number: 15645449

Start: 882220

End: 883581

Strand: Reverse

Name: gatA

Synonym: HP0830

Alternate gene names: 15645449

Gene position: 883581-882220 (Counterclockwise)

Preceding gene: 15645450

Following gene: 15645448

Centisome position: 52.98

GC content: 43.61

Gene sequence:

>1362_bases
ATGATCACTTTAAAACAAGCCCTTTCTTTATCCCAAGATGAATTAGAAACCCTTAAAAACGAAATTGACGCTAAGGTTAG
AGCTTCAGATTTGAACGCTTATATTAAAGCCCCTAGCCTTAATGGCGCTAGCGCTAAAGGGGTGCCGATTCTCATTAAAG
ACAATATCAGCGTTAAGGGGTGGGAAATCACTTGCTCCAGTAAGATTTTAGAAGGCTATGTCGCTCCTTATCATGCGAGC
GTGATGGAAAACTTGCACCAAAACAGCATGGCAGGGTTTGGGCTTTCTAACATGGACGAGTTTGCGATGGGAAGCACCAC
GGAGTCTAGTTGCTATGGGATCACTAAAAACCCACGAGATAAAAACAGAGTGCCTGGAGGGAGTAGCGGAGGGAGTGCGG
CAGCCGTGGCGGGCGGCTTAGCGGTAGCGGCTTTAGGGAGCGATACGGGCGGGTCTATCAGGCAGCCGGCGAGCTATTGC
GGGTGCGTGGGGTTAAAACCCACTTATGGGAGGGTGAGCCGTTATGGTTTGATCGCGTATTGCTCTAGTTTTGATCAAAT
CGGGCCTATCACGCAAAATGTAGAAGACGCTTCTATTTTATTTGACGCTATTAGCGGGTATGATAGCAAGGACTCCACGA
GCGCTAATCTCAAACCCACGCAAACCTTTAAAAACCTTAACAGAGACAAACGCTTTAAAATCGCTGTCTTAATGGATCAC
ATTAAAGACGCGAGCAATGAAGTGCAACTCGCTTATGAAAACACCCTTAAAGCCTTGAAAGAAATGGGGCATGAGATTGT
GGAAAAAAAGATGTTGGATTCGCATTATCAAATCTCTATTTATTATATTATCAGCATGGCTGAAGCGAGTTCGAATCTGG
CCAGATTTGATGGGGTGCGTTATGGGAGGAGGGCTCAAAATATTAAAGATTTGAAAGAATTGTATCTCAAAAGCCGCAGT
GAAGGTTTTGGCGATGAGGTGAAACGGCGCATCATGTTAGGGAATTTTGTCTTAAGCAGTGGGTATTATGACGCTTATTA
TTTGAAAGCCCAGCAAATGCGTTTGATAATTAAAGAGCAATACAACAAGATTTTTGAAGAAGTGGATTTGATTTTCACCC
CTGTAGCTCCCACGAGTGCTCATTTATTCAATTACCATGCAAGCCCTTTAGAAATGTATTTGAGCGATATTTACACGATT
GGGGCGAATTTGAGCGGTTTGCCAGCCCTTTCCTTGCCTGTCGCTAAAGATCCTTTAGGCTTGCCCATAGGGATGCAATT
CATTGCTAAGGCTTTTGATGAGCAAAGCCTTTTAGATGTTTCTTACGCTTTAGAGCAAGAATTAGATTTAAAATTAGATT
AA

Upstream 100 bases:

>100_bases
TTAAATAAGCAGGTTGAACGCTTTTTAAAAACGCTCTTATAAGCTCGTTTTATCTCTAAGCATGTTAAACTACCATTAAA
TTTTTTGTAAGGCTAAAAAC

Downstream 100 bases:

>100_bases
GGATAGAAAATGAGAATTTTACAAAGGGCTTTGACTTTTGAAGATGTGTTGATGGTGCCTAGAAAGTCTAGCGTTTTACC
TAAAGATGTGAGCTTAAAGT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit A

Products: NA

Alternate protein names: Glu-ADT subunit A [H]

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITCSSKILEGYVAPYHAS
VMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYC
GCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRDKRFKIAVLMDH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNIKDLKELYLKSRS
EGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIKEQYNKIFEEVDLIFTPVAPTSAHLFNYHASPLEMYLSDIYTI
GANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD

Sequences:

>Translated_453_residues
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITCSSKILEGYVAPYHAS
VMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYC
GCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRDKRFKIAVLMDH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNIKDLKELYLKSRS
EGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIKEQYNKIFEEVDLIFTPVAPTSAHLFNYHASPLEMYLSDIYTI
GANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD
>Mature_453_residues
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKGWEITCSSKILEGYVAPYHAS
VMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYC
GCVGLKPTYGRVSRYGLIAYCSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRDKRFKIAVLMDH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNIKDLKELYLKSRS
EGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIKEQYNKIFEEVDLIFTPVAPTSAHLFNYHASPLEMYLSDIYTI
GANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=463, Percent_Identity=35.4211663066955, Blast_Score=269, Evalue=4e-72,
Organism=Homo sapiens, GI195972892, Length=407, Percent_Identity=23.8329238329238, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17543272, Length=407, Percent_Identity=34.8894348894349, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17556264, Length=238, Percent_Identity=32.7731092436975, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17537465, Length=445, Percent_Identity=25.6179775280899, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71990152, Length=264, Percent_Identity=31.0606060606061, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17556276, Length=249, Percent_Identity=30.5220883534137, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17556278, Length=249, Percent_Identity=30.5220883534137, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538252, Length=259, Percent_Identity=24.7104247104247, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538254, Length=254, Percent_Identity=25.1968503937008, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323950, Length=417, Percent_Identity=35.4916067146283, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6319685, Length=396, Percent_Identity=27.5252525252525, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24648113, Length=465, Percent_Identity=37.4193548387097, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24644968, Length=428, Percent_Identity=27.1028037383178, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24652985, Length=418, Percent_Identity=27.511961722488, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI19922090, Length=418, Percent_Identity=27.511961722488, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24652981, Length=418, Percent_Identity=27.511961722488, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24652983, Length=418, Percent_Identity=27.511961722488, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI45550774, Length=438, Percent_Identity=25.1141552511416, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24648435, Length=438, Percent_Identity=25.1141552511416, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24648437, Length=438, Percent_Identity=25.1141552511416, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24648441, Length=433, Percent_Identity=25.4041570438799, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24648439, Length=433, Percent_Identity=25.4041570438799, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21356731, Length=420, Percent_Identity=23.5714285714286, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI161078093, Length=418, Percent_Identity=25.3588516746411, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: 6.3.5.-

Molecular weight: Translated: 49653; Mature: 49653

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKG
CCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCEEEE
WEITCSSKILEGYVAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRD
EEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY
CCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
CSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRDKRFKIAVLMDH
HHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVR
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHCCHHHHCCCH
YGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIKEQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH
YNKIFEEVDLIFTPVAPTSAHLFNYHASPLEMYLSDIYTIGANLSGLPALSLPVAKDPLG
HHHHHHHHHEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKG
CCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCEEEE
WEITCSSKILEGYVAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRD
EEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY
CCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH
CSSFDQIGPITQNVEDASILFDAISGYDSKDSTSANLKPTQTFKNLNRDKRFKIAVLMDH
HHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVR
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHCCHHHHCCCH
YGRRAQNIKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLIIKEQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH
YNKIFEEVDLIFTPVAPTSAHLFNYHASPLEMYLSDIYTIGANLSGLPALSLPVAKDPLG
HHHHHHHHHEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA