| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645012
GI number: 15645012
Start: 394337
End: 395089
Strand: Reverse
Name: Not Available
Synonym: HP0384
Alternate gene names: NA
Gene position: 395089-394337 (Counterclockwise)
Preceding gene: 15645016
Following gene: 15645010
Centisome position: 23.69
GC content: 36.75
Gene sequence:
>753_bases ATGCAAAAAAATATATTAAAAATGACGCTGTTGTTGGTTTTCCTCTTTTTAAGAAACGCTGTTGGTCTAGAGGACAAAAA AGCGACTACCCAGCCTGAGAGCGTTCAAAATACGCCCAAAGATTTACCCCCTATCCAATTAAGGCTCAATCAAGTCCATG AAGAACTTATAGAAATGTTAGAAAATATGGGGAAAGGCACGCAGTATGAGTTCCCTAAAATCAAAGAAATCCTAGAGCAA AGCGAAGAAGAATGGCTCAAAGTCGCCCATGAAGAATGCGTGGCGTTGGTTATGCTAATAAGCCCCAAGGCTTCTATTGA AAATAGTCCGATTTATAAGAATTGCTATGAAGCTTATGTGAAGCAAAGAATCCATGATTTATATGATTTTTATATAGAAA GCAAAAAGGTGAAAAGAAAAATCAAGAAAGCCCATAAGCAAGAGACCGCTATTAATCAATCCCAGCCCCTAACAAAAGAG TCGCCTAAAAACGAAAATAAAAAGAACTTAGTAAAACCTAACTTAAAAGATGCGAGTATCCCTAAAGGGTATTACTTGCA AATTGGGGCYYTTTTGAACGCGCCCAGTAAGGATTTTTTGCAAACGCTCAAAACTTTCCCTTACCAAATAAAGAAAAAAG ACTCCCTCACGCATTATTTTATTGGCCCTTATAAAACGAAAGAAGAAGCCCTAAAACAGCTTGAAAATGCAATTAAAAGC TTTAAAAATAAGCCTGTGTTGGTGGAAAAGTAA
Upstream 100 bases:
>100_bases GTAACTAAAACCCCATTTTTTAAACCATTCTTATGGTGGTATTTGGTATTTTTTATTACCATAAAGTAACAAAATAGAGA GCTTTACTTGGGAATGATAA
Downstream 100 bases:
>100_bases TCGTTTTAGCTATCCCTATTTGATGAAAACAAATCCATCGTTTTATTGGATTTTATAAAGCCACCTAGCTATTAGCGCAA CAAACAAACTCGCGCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLNQVHEELIEMLENMGKGTQYEFPKIKEILEQ SEEEWLKVAHEECVALVMLISPKASIENSPIYKNCYEAYVKQRIHDLYDFYIESKKVKRKIKKAHKQETAINQSQPLTKE SPKNENKKNLVKPNLKDASIPKGYYLQIGAXLNAPSKDFLQTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKS FKNKPVLVEK
Sequences:
>Translated_250_residues MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLNQVHEELIEMLENMGKGTQYEFPKIKEILEQ SEEEWLKVAHEECVALVMLISPKASIENSPIYKNCYEAYVKQRIHDLYDFYIESKKVKRKIKKAHKQETAINQSQPLTKE SPKNENKKNLVKPNLKDASIPKGYYLQIGAXLNAPSKDFLQTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKS FKNKPVLVEK >Mature_250_residues MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLNQVHEELIEMLENMGKGTQYEFPKIKEILEQ SEEEWLKVAHEECVALVMLISPKASIENSPIYKNCYEAYVKQRIHDLYDFYIESKKVKRKIKKAHKQETAINQSQPLTKE SPKNENKKNLVKPNLKDASIPKGYYLQIGAXLNAPSKDFLQTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKS FKNKPVLVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28977; Mature: 28977
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLNQVHEELIEML CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH ENMGKGTQYEFPKIKEILEQSEEEWLKVAHEECVALVMLISPKASIENSPIYKNCYEAYV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KQRIHDLYDFYIESKKVKRKIKKAHKQETAINQSQPLTKESPKNENKKNLVKPNLKDASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGYYLQIGAXLNAPSKDFLQTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKS CCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHH FKNKPVLVEK HCCCCCCCCC >Mature Secondary Structure MQKNILKMTLLLVFLFLRNAVGLEDKKATTQPESVQNTPKDLPPIQLRLNQVHEELIEML CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH ENMGKGTQYEFPKIKEILEQSEEEWLKVAHEECVALVMLISPKASIENSPIYKNCYEAYV HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KQRIHDLYDFYIESKKVKRKIKKAHKQETAINQSQPLTKESPKNENKKNLVKPNLKDASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGYYLQIGAXLNAPSKDFLQTLKTFPYQIKKKDSLTHYFIGPYKTKEEALKQLENAIKS CCCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHH FKNKPVLVEK HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA