| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644864
GI number: 15644864
Start: 246258
End: 246629
Strand: Reverse
Name: Not Available
Synonym: HP0236
Alternate gene names: NA
Gene position: 246629-246258 (Counterclockwise)
Preceding gene: 15644865
Following gene: 15644863
Centisome position: 14.79
GC content: 37.9
Gene sequence:
>372_bases ATGCGTTTGTTTATCGCGCTAGTTTTGTTTTGGTGGTGGTTAAGCTTGAACGCTAAAGAAGCGGATTTTATCTCTGATTT AGAATACGGGATGGCTCTTTATAAAAACCCTAGGGGTGTTGCGTGCGCGAAATGCCATGGCATTAAAGGCGAACAACAAG AAATCACCTTTTATTATGAAAAAGGCGAGAAAAAAATCCTCTACGCCCCTAAAATCAACCATTTGGATTTTAAAACCTTT AAAGACGCCTTGAGTTTAGGCAAAGGCATGATGCCTAAATACAATCTCAATTTAGAAGAAATCCAAGCGATTTATCTTTA TATCATCTCTTTAGAGCATAAAGAAGAGCGTAAGGATTCTCCTAAGCCTTAA
Upstream 100 bases:
>100_bases AAGGGGATAAAACTAAAGCGTTTGATTTAGTTCAAGAGCTTTTAGAAGAATTTTTGCAAAGCGGGGCTAAAGAGATTTTA GAAAAGGCGCAGTTGTTTTA
Downstream 100 bases:
>100_bases TCAAAGCGCTTGATTTATGCTAAAATGGAGCGTTGCATTTTTGTTTTGATTAAAGAAGGGTTCTAAAAATCAGAATTTAA AAGAAGGTAAAAATGGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRLFIALVLFWWWLSLNAKEADFISDLEYGMALYKNPRGVACAKCHGIKGEQQEITFYYEKGEKKILYAPKINHLDFKTF KDALSLGKGMMPKYNLNLEEIQAIYLYIISLEHKEERKDSPKP
Sequences:
>Translated_123_residues MRLFIALVLFWWWLSLNAKEADFISDLEYGMALYKNPRGVACAKCHGIKGEQQEITFYYEKGEKKILYAPKINHLDFKTF KDALSLGKGMMPKYNLNLEEIQAIYLYIISLEHKEERKDSPKP >Mature_123_residues MRLFIALVLFWWWLSLNAKEADFISDLEYGMALYKNPRGVACAKCHGIKGEQQEITFYYEKGEKKILYAPKINHLDFKTF KDALSLGKGMMPKYNLNLEEIQAIYLYIISLEHKEERKDSPKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14439; Mature: 14439
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFIALVLFWWWLSLNAKEADFISDLEYGMALYKNPRGVACAKCHGIKGEQQEITFYYE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEE KGEKKILYAPKINHLDFKTFKDALSLGKGMMPKYNLNLEEIQAIYLYIISLEHKEERKDS CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCHHCCCC PKP CCC >Mature Secondary Structure MRLFIALVLFWWWLSLNAKEADFISDLEYGMALYKNPRGVACAKCHGIKGEQQEITFYYE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEE KGEKKILYAPKINHLDFKTFKDALSLGKGMMPKYNLNLEEIQAIYLYIISLEHKEERKDS CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCHHCCCC PKP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA