| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644663
GI number: 15644663
Start: 30071
End: 31852
Strand: Reverse
Name: Not Available
Synonym: HP0030
Alternate gene names: NA
Gene position: 31852-30071 (Counterclockwise)
Preceding gene: 15644678
Following gene: 15644662
Centisome position: 1.91
GC content: 36.7
Gene sequence:
>1782_bases ATGCTATTGAATTACGATTTTTTAGAATTTGTTGATGAGCCGAAAAGAAACACTTCTTTGACAGCATCTATTGATAAAGC GTTAGCGGACAGGAAGTTAGCTAGACAAAATAAACCTAGCGTTAGGGTGCTTGGTAAGGCGATGCCCTTAAGCAAGTTTT TAGATGCTGTTGGCGATGAAATCTCACGACTTAAATATGATATGAGCCACAAGACTATTAAAGGCTCTACAATTGAGAGT TCTAATCTTATCAGCATTTATAAAAAGATTGCGAGCGGACTACCTTTTGGGACTATCTCGGCGTTTAGACCTTTTAAAGA CGCTTTTTATAAAGACTTTACCGAAAAAGAACAAAACGCTCTAATCTATGCTTATAAGAGCGGAGCAGACCCTAAAAATG CGGACATAATAGCCAAATATTGGTTAAGTCAATCTGTGGATTTAGACCCATACGACCCTATTAAAGTTGTAGATTTCTTT CACCCACAACCTGAAAATGGTAAAGAGACTACAAAATTTAAGAACTACAAAGATAGGATTGAGAACATTTATGCGACACT CTATAACACATTGGGTAGGGGTTATGTGGATAAATTTTTTAAAAAAGAAGCCACAATGAGGGACTTTATGTCTAGCGATA AATTTGTTGAGAGATACCGCTACACTAGAAAAGAAAATATGGCAAGGACACAAGCATTAAAAGACATAATGAATATTGAC AGAGATTTCATTGGTTATATTGAAGTGTTAGGGTATTGGAAAGACAACCCTAAAGACAATATCTTACCAGACAAAGAGGT TAGCTTTTTTGTATTCCAAAACGAACCTAGTAGCACATTTGATTTGAAAAACCACTTATTGATATGGGGTAAACAATTCA GACAAGTAGCGATTTGCTATGGCGGACAATTGATTGCTAATAAGAATAAGACTTATAGGATAGATTTGATAAGTTGCAGA CCTGATAATTTTGGTGAGGTTTGGGCTAAATTCACAGGGATTAAATTTTCAGTTCCTAGCGACTTACCACAAGCTCTCAC ACGCATAAATGACAGCGTTTATACTTTTCTCTCTAGGAATAAAGAGGGTATCGGTCTTAATAAACTCGCTCTCAATAAAG TCGTTAAGACAGAATTAAAAGCGACTTGTATGCCCTATGATTACTCTAAATTGGGTATAGAGACTATTGGCGAGGACATT AGAAGCAATATTAAAGCATTACAGAAAATGTCTCGTGGGTATGGACACCCTAAAGAGTTCTTTTTGGACGCAATGATAAA AAAACAGGAAAATGCGATTAAACGCATAGAAGCACGAAAATGTGCGGTAAGCGATGACTTCAAACAAGGTATGAAACGAA ACATTAAAGTTAATAACCTTGTTAAAGCTATGCGACAAGGCAAAAAAGTGAGTAGGACATTGATTGCTAAAGTGCTTGCT AACACCATAGACACCGATGCGGGTTATTGCTTCATTTCGCCGACAGATTTAGCGACACAACTTGGCAACATCAGCCCTAG ACTATCTAAAAGCATAGTTACCGCCATAGAGCAAGCAGAGGGCGTGAGACTGAATTATGCGTTGATTGACAAAATCACCT ATAACTCACTCCACAATATCTTAAGTTTCATTTTTGATATTGATAACCCTTTAAGCGACCAAGTGTTTGAGAGATTAGTC ATTGAAGTCCCAAGAGAAGCACTTAAAAATGTGAAGTTGCCACAAATCAAAAATGTATTGACTTCTCAAATCTTTGATGG CGCTTACCACTTTAAAAGTTAA
Upstream 100 bases:
>100_bases ACCTTAAATGAAGTTTTGGTATTATACCAAATAAACCCTAATGACCCGCTGAAAGCTCAAAGATAAAGCGCTACAATCTC GCTTAGAAAAAGGACACAAA
Downstream 100 bases:
>100_bases ACCATGCTCTTTATCAGCGCAACTAACACGAATGCCGGAAAAACCACATGCGCTAGGCTATTAGCCCAGTATTGCAACGC TTGTGGCGTTAAAACTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS
Sequences:
>Translated_593_residues MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS >Mature_593_residues MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67898; Mature: 67898
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDE CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHH ISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNA HHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCE LIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDRI EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH ENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICY HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCEEEECHHHHEEHHHC GGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRN CCEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCC KEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHPKEF CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNI HHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH LSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS HHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDE CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHH ISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNA HHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCE LIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDRI EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH ENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICY HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCEEEECHHHHEEHHHC GGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRN CCEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCC KEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHPKEF CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNI HHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH LSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS HHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA