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Identifier: 16519743

GI number: 16519743

Start: 465728

End: 466291

Strand: Direct

Name: Not Available

Synonym: NGR_a03630

Alternate gene names: NA

Gene position: 465728-466291 (Clockwise)

Preceding gene: 16519744

Following gene: 16519740

Centisome position: 86.86

GC content: 60.28

Gene sequence:

>564_bases
GTGTGTCAGTGGGCGGCAACGAAGGGCACGCGCAACCATGCGTACGAGCGCGAAAAACTCGAGCGCGCCTTCGCGAAAAT
CCTACGGCATCGTGACCCGTCGGTCCCTCCGCGCCGGTCGGATCCGAGACCCCGGAAGGAGGTGGCCAGGCAATGGCGAA
AGCCCCATATCTACTCACCTGCCGACTTGAGACGGATGCTCGACATTGCGCGATCCTATCCATCGCCGCGAGCTGCACTT
CGCCAGGAGAACATGTATACCATGCTGTTGCTGGCTTATTGCGCGGGTCTGCGGCGAGGCGAATTGGCCAGACTTGATCT
TGGTGACGTTAACCTCGGCGACGGCACCATCACGGTTCGGCAAACAAAGTTCTTCAAGACCCGGATCCTGCCGCTTCCCG
ACAGTGTAGTGGTTAGCTTCGGACCTATATCGTTGCACGGCGTCGGGTCGGCGCATAGCAGGCTCCTCACTCCGCCCTGT
TCTGGCACGAACAAGGCAGTTCCCGCTCCACGCCAGGAAGGATCACCTGGTTGCTTACAGACGTCATACGTCGTGCCGGG
TTGA

Upstream 100 bases:

>100_bases
GCGTCGCAGGGGATACAAGTATACGTCGCAACCGGTGTTGTTCTTGCAGTTCGATCGGTTCCTGCAGCTGAACCCGTAAC
TGGAAACCGAGCCGCTGAGT

Downstream 100 bases:

>100_bases
AAGGCAAAGCCGGCCCACGCGTTCACGATCTGCGCCACTCGATGGTCGTAAACCGTATCCTTGAATGGTACCGACTGGGC
AGGGACGGCCGGCGAGTGGG

Product: DNA integration/recombination/inversion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MCQWAATKGTRNHAYEREKLERAFAKILRHRDPSVPPRRSDPRPRKEVARQWRKPHIYSPADLRRMLDIARSYPSPRAAL
RQENMYTMLLLAYCAGLRRGELARLDLGDVNLGDGTITVRQTKFFKTRILPLPDSVVVSFGPISLHGVGSAHSRLLTPPC
SGTNKAVPAPRQEGSPGCLQTSYVVPG

Sequences:

>Translated_187_residues
MCQWAATKGTRNHAYEREKLERAFAKILRHRDPSVPPRRSDPRPRKEVARQWRKPHIYSPADLRRMLDIARSYPSPRAAL
RQENMYTMLLLAYCAGLRRGELARLDLGDVNLGDGTITVRQTKFFKTRILPLPDSVVVSFGPISLHGVGSAHSRLLTPPC
SGTNKAVPAPRQEGSPGCLQTSYVVPG
>Mature_187_residues
MCQWAATKGTRNHAYEREKLERAFAKILRHRDPSVPPRRSDPRPRKEVARQWRKPHIYSPADLRRMLDIARSYPSPRAAL
RQENMYTMLLLAYCAGLRRGELARLDLGDVNLGDGTITVRQTKFFKTRILPLPDSVVVSFGPISLHGVGSAHSRLLTPPC
SGTNKAVPAPRQEGSPGCLQTSYVVPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4GA_RHISN (P55457)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443863.1
- ProteinModelPortal:   P55457
- SMR:   P55457
- GeneID:   962544
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03630
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- Gene3D:   G3DSA:1.10.443.10

Pfam domain/function: PF00589 Phage_integrase; SSF56349 DNA_brk_join_enz

EC number: NA

Molecular weight: Translated: 20938; Mature: 20938

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQWAATKGTRNHAYEREKLERAFAKILRHRDPSVPPRRSDPRPRKEVARQWRKPHIYSP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
ADLRRMLDIARSYPSPRAALRQENMYTMLLLAYCAGLRRGELARLDLGDVNLGDGTITVR
HHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
QTKFFKTRILPLPDSVVVSFGPISLHGVGSAHSRLLTPPCSGTNKAVPAPRQEGSPGCLQ
EHHHHHEECCCCCCHHEEEECCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
TSYVVPG
CCEECCC
>Mature Secondary Structure
MCQWAATKGTRNHAYEREKLERAFAKILRHRDPSVPPRRSDPRPRKEVARQWRKPHIYSP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
ADLRRMLDIARSYPSPRAALRQENMYTMLLLAYCAGLRRGELARLDLGDVNLGDGTITVR
HHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
QTKFFKTRILPLPDSVVVSFGPISLHGVGSAHSRLLTPPCSGTNKAVPAPRQEGSPGCLQ
EHHHHHEECCCCCCHHEEEECCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE
TSYVVPG
CCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424