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Identifier: 16519744

GI number: 16519744

Start: 465193

End: 465612

Strand: Direct

Name: Not Available

Synonym: NGR_a03620

Alternate gene names: NA

Gene position: 465193-465612 (Clockwise)

Preceding gene: 16519745

Following gene: 16519743

Centisome position: 86.76

GC content: 58.33

Gene sequence:

>420_bases
ATGACCGCCCGTTGGCCCGATCCCGATCGCGCGTACATTGGCCGCTATGTCGCGAGCCTTGATCTGCGCAGTATCAAAAG
CCGGACTTGTTACCGTCAAGTCCTGCATGGCTTCCAGGACGTTGTCGAACGTCACGAGGCACTCGACCAACAGGTGCTAC
TGGCCTGGTTGCGGCAGTCGTCTGACCGTTGGGCTGCGACGACACTGCTACATCGGACCCGCATTATCGATCGGTTCCTC
GACCACTTCTTGGAAGCGGCTGCGATTGATCACAATCCCGTCGAAGATTTGCGTGAGGCATGCCACATCAAACAGTGCAT
GCCAGTCTGGCGCGCATTGATATCATGTGATCCAGAACAGGCTCTTGCCCAACTGCGTCAGCCCGAACCGTTCGGCAGCG
CTGGGCGGGATCATGGCTGA

Upstream 100 bases:

>100_bases
TGGGGCATCGATCGATTGCGTCGACGGCGCCCTACCTCAAGCTTGCGACCGAGGATCTCAGGGCCATCGCTCTTGATTTG
CCGGGAACGGAGGTGTCGGC

Downstream 100 bases:

>100_bases
GCATGTCGCGATGATGCGTCGCAGGGGATACAAGTATACGTCGCAACCGGTGTTGTTCTTGCAGTTCGATCGGTTCCTGC
AGCTGAACCCGTAACTGGAA

Product: DNA integration/recombination/inversion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTARWPDPDRAYIGRYVASLDLRSIKSRTCYRQVLHGFQDVVERHEALDQQVLLAWLRQSSDRWAATTLLHRTRIIDRFL
DHFLEAAAIDHNPVEDLREACHIKQCMPVWRALISCDPEQALAQLRQPEPFGSAGRDHG

Sequences:

>Translated_139_residues
MTARWPDPDRAYIGRYVASLDLRSIKSRTCYRQVLHGFQDVVERHEALDQQVLLAWLRQSSDRWAATTLLHRTRIIDRFL
DHFLEAAAIDHNPVEDLREACHIKQCMPVWRALISCDPEQALAQLRQPEPFGSAGRDHG
>Mature_138_residues
TARWPDPDRAYIGRYVASLDLRSIKSRTCYRQVLHGFQDVVERHEALDQQVLLAWLRQSSDRWAATTLLHRTRIIDRFLD
HFLEAAAIDHNPVEDLREACHIKQCMPVWRALISCDPEQALAQLRQPEPFGSAGRDHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4GB_RHISN (P55458)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443864.1
- GeneID:   962309
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03620
- InterPro:   IPR023109
- Gene3D:   G3DSA:1.10.150.130

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16113; Mature: 15982

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARWPDPDRAYIGRYVASLDLRSIKSRTCYRQVLHGFQDVVERHEALDQQVLLAWLRQS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDRWAATTLLHRTRIIDRFLDHFLEAAAIDHNPVEDLREACHIKQCMPVWRALISCDPEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALAQLRQPEPFGSAGRDHG
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARWPDPDRAYIGRYVASLDLRSIKSRTCYRQVLHGFQDVVERHEALDQQVLLAWLRQS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SDRWAATTLLHRTRIIDRFLDHFLEAAAIDHNPVEDLREACHIKQCMPVWRALISCDPEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALAQLRQPEPFGSAGRDHG
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424