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Identifier: 16519740

GI number: 16519740

Start: 470138

End: 471214

Strand: Direct

Name: Not Available

Synonym: NGR_a03660

Alternate gene names: NA

Gene position: 470138-471214 (Clockwise)

Preceding gene: 16519743

Following gene: 16519739

Centisome position: 87.69

GC content: 60.35

Gene sequence:

>1077_bases
TTGCGCAATGTAATTAAACTGACATGGAGCCGGCGTAAGAGGAGCGCGTCGCTCGATAAGGGAGAGAACATCATGAAACT
GGCATTTGCATTTGCGACCGCCGCCATCGTCGTGGCCGCGGCCTTTCCAGCGCTGGCCGACACACTGACCGTCTACAGCC
CGCAAGGCGGTGAGCGCGGGGCATGGATCGCTGAACAGGCCAAGGCAGCGGGTCATGAGATTAAGCTACTGAACGCAGGG
GGCGGCGAACTCTACGATCGCCTGATCGCCGAGGAGAACAACCCGCAAGCCGACGTCGTTCTCGGGATGGTAGACACCTC
GATGGCCCTCTTAAAGAAGGAAGGCCTCTTCCAGCCCTATTCGCCGTCCTGGGCCAAGGACCTTCCGGCACAATATAAGG
ACGCGGAAGGCCTGGTCCACAAGTTCTGGCAGACGCCGATCGTGCTCGCGTACTACCCCGACCGACTGGCCGACCCAGAC
GCGCCGAAAAGCTGGCTGGATCTGACGAAGGACGATTATGAGGGCAAATATGTCATCGGCTCCACGGCGGCCCAGACGAC
CCGCATGTATCTTGCCGGCATCCTCGTCCGTTTCCTCGACGCCGATGGTGAGGTATCCGATGAGGGATGGGATTTCCTGG
ACAGGTTTTATGCTGAGGGCATTATCGCCAACGATGCGGATTCCCAGCTCGAGGCGTTCAAGTCCGGTCGCGCCTCCATC
GATCTGAATTGGCTCGGCGGCGCTTTGAAGCGGGCCGATGACCTCGACGCGAAAGTCCAGGTGATCGACACCGACGGCGG
CACTCCGGTGATTTCCGAAGGTGTGGCGATCATGGCCGGGACCGATCAACTCGATGAGGCCAAGGCCTTCGTCGACTGGT
GGGGATCGGCCGATGTGATGGCCGCATACGCCGCCAAGTTCGGCCAGGTCCCTGTCCTGCCGGAAGCGCTCGCCAAGTCG
CCGGCCACCGTTCAGGCGAATGCCAAGCTCGTCAACACCCAGCCGATCGATTGGGATGCAATCGCTCCAAAGCTCGACAG
CTGGCTGCAGAAGATCGAGCTTGAAATCCGTCAATGA

Upstream 100 bases:

>100_bases
ACGAGGCGTCGTTCATTGAGGGAGAGCTCGGGCAAAACAGGCATGGCAAAGTCCGCAAATCGGTCGAAGTTTCAGGAAAG
CTATTGCAAGGAAAATTAAA

Downstream 100 bases:

>100_bases
GCGCGGCTCTGCATGGATCGGAGGTCTAGAGCCATGGCTGACAGCGTTCTGTCCCTCAACAAACTCGACGTCGGCTTCCC
TGGCATGACCGTTGTCCGTG

Product: substrate-binding periplasmic component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRNVIKLTWSRRKRSASLDKGENIMKLAFAFATAAIVVAAAFPALADTLTVYSPQGGERGAWIAEQAKAAGHEIKLLNAG
GGELYDRLIAEENNPQADVVLGMVDTSMALLKKEGLFQPYSPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADPD
APKSWLDLTKDDYEGKYVIGSTAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAEGIIANDADSQLEAFKSGRASI
DLNWLGGALKRADDLDAKVQVIDTDGGTPVISEGVAIMAGTDQLDEAKAFVDWWGSADVMAAYAAKFGQVPVLPEALAKS
PATVQANAKLVNTQPIDWDAIAPKLDSWLQKIELEIRQ

Sequences:

>Translated_358_residues
MRNVIKLTWSRRKRSASLDKGENIMKLAFAFATAAIVVAAAFPALADTLTVYSPQGGERGAWIAEQAKAAGHEIKLLNAG
GGELYDRLIAEENNPQADVVLGMVDTSMALLKKEGLFQPYSPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADPD
APKSWLDLTKDDYEGKYVIGSTAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAEGIIANDADSQLEAFKSGRASI
DLNWLGGALKRADDLDAKVQVIDTDGGTPVISEGVAIMAGTDQLDEAKAFVDWWGSADVMAAYAAKFGQVPVLPEALAKS
PATVQANAKLVNTQPIDWDAIAPKLDSWLQKIELEIRQ
>Mature_358_residues
MRNVIKLTWSRRKRSASLDKGENIMKLAFAFATAAIVVAAAFPALADTLTVYSPQGGERGAWIAEQAKAAGHEIKLLNAG
GGELYDRLIAEENNPQADVVLGMVDTSMALLKKEGLFQPYSPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADPD
APKSWLDLTKDDYEGKYVIGSTAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAEGIIANDADSQLEAFKSGRASI
DLNWLGGALKRADDLDAKVQVIDTDGGTPVISEGVAIMAGTDQLDEAKAFVDWWGSADVMAAYAAKFGQVPVLPEALAKS
PATVQANAKLVNTQPIDWDAIAPKLDSWLQKIELEIRQ

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FP_RHISN (P55454)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443860.1
- ProteinModelPortal:   P55454
- GeneID:   962538
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03660
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 39015; Mature: 39015

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVIKLTWSRRKRSASLDKGENIMKLAFAFATAAIVVAAAFPALADTLTVYSPQGGERG
CCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
AWIAEQAKAAGHEIKLLNAGGGELYDRLIAEENNPQADVVLGMVDTSMALLKKEGLFQPY
CHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC
SPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADPDAPKSWLDLTKDDYEGKYVIG
CCCHHHHCCCHHCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEE
STAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAEGIIANDADSQLEAFKSGRASI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHCCCCEE
DLNWLGGALKRADDLDAKVQVIDTDGGTPVISEGVAIMAGTDQLDEAKAFVDWWGSADVM
EEHHHCHHHHCCCCCCCEEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHCCCHHHH
AAYAAKFGQVPVLPEALAKSPATVQANAKLVNTQPIDWDAIAPKLDSWLQKIELEIRQ
HHHHHHHCCCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNVIKLTWSRRKRSASLDKGENIMKLAFAFATAAIVVAAAFPALADTLTVYSPQGGERG
CCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
AWIAEQAKAAGHEIKLLNAGGGELYDRLIAEENNPQADVVLGMVDTSMALLKKEGLFQPY
CHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC
SPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADPDAPKSWLDLTKDDYEGKYVIG
CCCHHHHCCCHHCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEE
STAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAEGIIANDADSQLEAFKSGRASI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHCCCCEE
DLNWLGGALKRADDLDAKVQVIDTDGGTPVISEGVAIMAGTDQLDEAKAFVDWWGSADVM
EEHHHCHHHHCCCCCCCEEEEEECCCCCCCHHCCEEEEECCCCHHHHHHHHHHCCCHHHH
AAYAAKFGQVPVLPEALAKSPATVQANAKLVNTQPIDWDAIAPKLDSWLQKIELEIRQ
HHHHHHHCCCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424