Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669751

Identifier: 15669751

GI number: 15669751

Start: 1532696

End: 1533634

Strand: Direct

Name: 15669751

Synonym: MJ1556

Alternate gene names: NA

Gene position: 1532696-1533634 (Clockwise)

Preceding gene: 15669750

Following gene: 15669752

Centisome position: 92.06

GC content: 28.65

Gene sequence:

>939_bases
ATGATGGATAAGATAATTCAAACACTTACATTGACATTTACTTTTTTGTATTACAGCATTCCAATGCTTATTGTTGGTTT
ATTTATCTCTCAAATTCTCATAGAGAGTAATATCATCAAAAAAATCTATTTTATTGGAAAGATATTTACAAGATTGGCAA
ATCTTCCAGAGGAGTGTGGGATAGCTATAACAACATCTTTTATTGAACCAAGAATGGCAAACATAATGCTTGTAGATTTT
TATAAAAAAGGGATTATAAACAAAAAAGAACTCTATATCTCATCTTTAATAGATGCATTTCCGGCAATGCTTAGGCACTG
GGATTCTTTATTGCCAATTTTGCTTGCCACCTTAGGATTCTTTGGAATAATCTATTTTATAATCTTAGTTTTGATTGGAT
TTATTCAAACACTCATTTTTATGGCTATTGGAAAGATAACATTAAAAAATAGGGAGTATAAAGAAGATAACACAGACAAA
AAGATAAAACTAAATAAAGATGTTGTTTATACAGCTTTTAAAAACACTATAAAGTATGGAATTCCAATAATAAGGGATAT
AACAATAGCCTCCATTATAACCTCATTTTTGATTGAATTTGGATTTTTTGACTATATAACTGAGATTATAAAAAATAAAG
CTTATTATCTACCACTTTCAGTTGAAGAAATTACTGTGGCAGTTACCCAACCAATAAACTACATAGGAGCTTTTGTCTTA
GCTGGAGAGTTTTTAAATAGGGGAATTTTAGATGAGATTGAAGTTGTAAGAGCTTTACTTCTTGGCTCTATATTATCAAG
CATTCCAGCGTTGAGATTTTTAGCTCCATATTATATAGGCATATATGGATTTAAAGATGGTTTTAATTTGATGATGATAT
CTACATTAGTTAGAATTTTGATAACTGCGTTGTTTGTGATAATAACTTTAATATTGTGA

Upstream 100 bases:

>100_bases
GCAAGAGAACATTAGAGAGTGTGTTTTATTCCCAAGAGATAGGCAGAGATTAACTCCATAATTTTTAAATACTTTTTAAT
GAGAAATTAATAAGATTATT

Downstream 100 bases:

>100_bases
GATTATGGGTATAAAATATCAAAAGATTGGAGATGTTGTTATCGTTAAAAAAGAATTAAGTGAGGATGAAATTAGAGAGA
TTGTAAAAAGAACTAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF
YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK
KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL
AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL

Sequences:

>Translated_312_residues
MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF
YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK
KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL
AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL
>Mature_312_residues
MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF
YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK
KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL
AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL

Specific function: Unknown

COG id: COG3366

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1556_METJA (Q58951)

Other databases:

- EMBL:   L77117
- PIR:   C64494
- RefSeq:   NP_248564.1
- ProteinModelPortal:   Q58951
- GeneID:   1452464
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1556
- NMPDR:   fig|243232.1.peg.1601
- TIGR:   MJ1556
- OMA:   PRMANIM
- ProtClustDB:   CLSK2517750
- BioCyc:   MJAN243232:MJ_1556-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35563; Mature: 35563

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc1df7a0)-; HASH(0xe97e238)-; HASH(0xec48908)-; HASH(0xddf3bb4)-; HASH(0xef133d0)-; HASH(0xb847c78)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
IAITTSFIEPRMANIMLVDFYKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGF
CEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDKKIKLNKDVVYTAFKNTIKYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHC
IPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHHHHHHHHHH
AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRIL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
ITALFVIITLIL
HHHHHHHHHHHH
>Mature Secondary Structure
MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
IAITTSFIEPRMANIMLVDFYKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGF
CEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDKKIKLNKDVVYTAFKNTIKYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHC
IPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHHHHHHHHHH
AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRIL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
ITALFVIITLIL
HHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087