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The map label for this gene is 15669752

Identifier: 15669752

GI number: 15669752

Start: 1533639

End: 1534388

Strand: Direct

Name: 15669752

Synonym: MJ1557

Alternate gene names: NA

Gene position: 1533639-1534388 (Clockwise)

Preceding gene: 15669751

Following gene: 15669754

Centisome position: 92.11

GC content: 30.4

Gene sequence:

>750_bases
ATGGGTATAAAATATCAAAAGATTGGAGATGTTGTTATCGTTAAAAAAGAATTAAGTGAGGATGAAATTAGAGAGATTGT
AAAAAGAACTAAATGTAAAGCTATCTTGCTATACACAACCCAAATAACCGGTGAATTTAGAACTCCACATGTAAAAATCC
TATATGGGAAAGAAACAGAAACAATCCATAAAGAATATGGCTGTTTGTTTAAGTTAGATGTTGCTAAGATTATGTGGAGT
CAGGGAAATATTGAGGAAAGGAAAAGAATGGCATTTATAAGCAATGAGAATGAGGTAGTTGTTGATATGTTTGCTGGTAT
TGGTTATTTCACAATTCCATTAGCTAAATACTCAAAACCAAAGTTGGTCTATGCAATCGAAAAAAATCCTACAGCTTATC
ATTATCTATGTGAAAACATCAAATTAAATAAACTAAATAATGTCATCCCAATTTTAGCAGATAATAGAGACGTTGAGTTA
AAAGATGTCGCAGATAGAGTTATCATGGGCTATGTACATAAAACACACAAATTTTTAGATAAGACTTTTGAATTTTTAAA
AGATAGGGGAGTTATACATTATCATGAAACAGTAGCTGAAAAGATTATGTATGAAAGACCAATAGAGAGATTAAAATTCT
ATGCTGAAAAAAATGGCTATAAATTGATAGATTATGAAGTGAGAAAGATTAAAAAATACGCTCCAGGCGTTTGGCATGTT
GTTGTAGATGCTAAATTTGAAAGGATTTGA

Upstream 100 bases:

>100_bases
TATGGATTTAAAGATGGTTTTAATTTGATGATGATATCTACATTAGTTAGAATTTTGATAACTGCGTTGTTTGTGATAAT
AACTTTAATATTGTGAGATT

Downstream 100 bases:

>100_bases
TTAAATTCTATGCATGTATTTAAATATATCTTCATGCTGGACAATGACTTGAACACCCAATTCTTCTCCAGCTTTTTCAA
GTTCTTTTTTTAGTGTTGCA

Product: met-10+ related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MGIKYQKIGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETETIHKEYGCLFKLDVAKIMWS
QGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL
KDVADRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHV
VVDAKFERI

Sequences:

>Translated_249_residues
MGIKYQKIGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETETIHKEYGCLFKLDVAKIMWS
QGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL
KDVADRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHV
VVDAKFERI
>Mature_248_residues
GIKYQKIGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETETIHKEYGCLFKLDVAKIMWSQ
GNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELK
DVADRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHVV
VDAKFERI

Specific function: Unknown

COG id: COG2520

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase trmD family

Homologues:

Organism=Homo sapiens, GI157388919, Length=155, Percent_Identity=36.7741935483871, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193207541, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193207539, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193207537, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321861, Length=125, Percent_Identity=34.4, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1557_METJA (Q58952)

Other databases:

- EMBL:   L77117
- PIR:   D64494
- RefSeq:   NP_248565.1
- PDB:   3A27
- PDBsum:   3A27
- ProteinModelPortal:   Q58952
- SMR:   Q58952
- GeneID:   1452465
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1557
- NMPDR:   fig|243232.1.peg.1602
- TIGR:   MJ1557
- HOGENOM:   HBG645264
- OMA:   THKFLDK
- ProtClustDB:   CLSK2392220
- BioCyc:   MJAN243232:MJ_1557-MONOMER
- InterPro:   IPR003402

Pfam domain/function: PF02475 Met_10

EC number: NA

Molecular weight: Translated: 29303; Mature: 29172

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKYQKIGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETE
CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCH
TIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKP
HHHHHCCCEEEEEHHHHHHCCCCHHHHHHEEEECCCCCEEEEEHHCCCEEEEECCCCCCC
KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHKTHKFLD
EEEEEEECCCCEEEEECCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHV
HHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEE
VVDAKFERI
EEECEECCC
>Mature Secondary Structure 
GIKYQKIGDVVIVKKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETE
CCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCH
TIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKP
HHHHHCCCEEEEEHHHHHHCCCCHHHHHHEEEECCCCCEEEEEHHCCCEEEEECCCCCCC
KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHKTHKFLD
EEEEEEECCCCEEEEECCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWHV
HHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEE
VVDAKFERI
EEECEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087