| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669737
Identifier: 15669737
GI number: 15669737
Start: 1518738
End: 1521164
Strand: Reverse
Name: 15669737
Synonym: MJ1542
Alternate gene names: NA
Gene position: 1521164-1518738 (Counterclockwise)
Preceding gene: 15669739
Following gene: 15669736
Centisome position: 91.36
GC content: 26.78
Gene sequence:
>2427_bases ATGGTGAAATTTATGAAAATAAAGTCAATAGCCGCTAAGAATTTACTATCATTTGATGATTTTAAAATAACATTTGAGGA TGGGGATGTTGTTACAATCTTCGGCCCCAATAATGTAGGAAAAACAAACTTATTTAGGGTTTTAAAATTACTAAGAAACA TTATAAATGAGAAAATATCAGCAGTAGATTTGGAAATATATTTACACAATAAAAATTTAAAAGCGGCAAAGATAGAGGTA GATGTGATATTTGACAAGAGTGATAAAGAGGTTATTGCCAAATTTCTTAAAATTTTCTTCAAAATAAATGCTCCAGATTT GATAAGACTATGTAACAACTTAAAGCTGAACATTATCAATAGTATTATTGATTATTTTTCAGCAGGGTCATATATTTGGG AGTGCTCTGAATTAAGGTGCTATAGACCATATTTTATGCTTAGATTGAGAAGTTTAGAAGAAGATATTGAAAAAATAAAA ATATACTTGAAAGAACGTGAATTATCAGAGATTACACCAGATTTAATTGACCATAGTAAGGTTATACATGAGTTGGACAG AAATGTTGAGATTATAGAAGTTACAAATGATTTAAAAAACATTATAACATCATCTGTAAATGCATTAATTACAATTTATG AAAAAAATGAGAAATTATTCTTTAGCACATTAATTGATGGTAAGGAGAATATCACAACAAGAATTGGAGATGGAAATATA GAAAATATTGTTGAAATCTCAATGAAAGATTTTACAAAAGACATTGAGAAATATGAAGATTGTTTTAAAAGATTAACAAT GGATAAAAACATATTGAGAGCATTTGTTGTATTATTGGCTTTGGATAAACTCTTAGCCAATAAAATGTCAATATATGTTA AGAAGGTTTTAGAATATTCAAAAGAAAATCCATGGGACAAAGAAATTATTGAAGATTTAAAATATATTGTAAGATTTTGT GGATTTGATTATAGGGACATATATGAAATTAGTGATATCTCACTAAATGATATTTTATTAAAAATATATGAAAACAGTCT AATATTTTATGAGGATTATTTACCAAATGAAGGCAAAGTAATGATTCCAGATTATATGATAGTTGAATTACTTGCTGGTT TAAAGAATAACAGTTTAGAAAAAAATGTGAAATCTAAAATATTGGAATTATTCAAAACATCCACAACAAAAGACGATTTA TATTTAGGTATATTAAGCATGCCATCTGAAAAATGGATACCCAGTTATTTGTTTTACTTAAAGAATAATGCAAATCTAAA GCTAAGAAAAAGATATATGAAAATTAAAGAGATGTTTGAATATATATTTAATAGTGGAAGTCTTAGTTTTGATGTAATTT TAGCTAATAATAAACCAGATATTGTAGTATATTCAGAAGACATTGAGATACCTCTGAACATGGTAGGACTTGGTGTGAAA AAAATCTTAGAAATTCTAACTTTAGTATTTGGGTATGAGTCAAAGGTTATTTTACTTGATACTCCATTTAATCAACTTTA CCCAAAATATCAAAAGAGATTTTCAAAGATTCTTAAAGATACTGAGAATATTGACTCACAGGTATTTATAATCTTACATT CTCCATATTTCATAAACAATGAAAATATATTCAATACATTTAGATTTTATAAACCTAAAAAATCCACCAAATACATATGT ATTGGGAGTATAATCAAAGACTTGGAAAAAACGTTTGGGACAGTAATTTTAGATAGAACTACCAGAAAGATATTACTATC TGACGCTGTAATTCTTTTAAGCTCTGCTTTAAGGGACATTCCATTATTCGACTTAGCTGAATACGAAGATATACCAATAG ACGAATATAATATCGAAGTTATTCGCCCGCAAAACACTTTAAGTTTTGGAAAATATTATGCTCTACTTCAATATACTTCC ATCCCATATATTCTTATGCTTAGAAGTTGGATACTTTATAACTTATATGAAGAAATAAAAGATGGTGAAGGAAAAGTTAG ATACAAACTATTAGAAAAAGGAAAGTATCATAAAATAGTAGAGGAACGCCTTAATTTCTTTAAAAATAGACATCCATTTT GGATTTCTAAAGAAGAGTTCGATAAAGTTATAAATATTTATATTAAAACTTTGGAAGCTCATAGGGAAAAACTTATTGAG TTAGGATACATATATCTCTCATCTAAAGAAGAAGTAGTTAAATACTGTATAGAACCATTAAGAAAGCAGTTAGAGGATAT CTTAAGAAAGAAGTTGTTTATATTTACCGTCCCTACAGATTTCATAATCGAACCACAAGACTTGAAAAACATTCAGATTG AGAAAGATAAATATATCGTTCATAACTATATTGGTTACAGAAAAGATGTATTAAAGGAATTCAAAGAATTCTTTGATTAC TTTGTTAAATTCCACAATTTACAGTAA
Upstream 100 bases:
>100_bases AACACAACTAAATTATAGTGAAATAAATTTAAAACATAAATGTTGGTTATAAACGATATTTAGCAATTACACGGAGAGCA TTATCCTAAAATTAAATAGT
Downstream 100 bases:
>100_bases TACAAGGTGAAACAGTGATATTGATAAAAAATGTATTTGTAAATGGGAAGAGACAGGATATACTAATTGAAGGAAATAAA ATAAAAAAGATTGGAGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 808; Mature: 808
Protein sequence:
>808_residues MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY FVKFHNLQ
Sequences:
>Translated_808_residues MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY FVKFHNLQ >Mature_808_residues MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY FVKFHNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1542_METJA (Q58937)
Other databases:
- EMBL: L77117 - PIR: E64492 - RefSeq: NP_248550.1 - ProteinModelPortal: Q58937 - SMR: Q58937 - GeneID: 1452450 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1542 - NMPDR: fig|243232.1.peg.1587 - TIGR: MJ1542 - OMA: VGKTNLF - ProtClustDB: CLSK2517746 - BioCyc: MJAN243232:MJ_1542-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95565; Mature: 95565
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKIS CCEEHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC AVDLEIYLHNKNLKAAKIEVDVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIIN EEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH SIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIKIYLKERELSEITPDLIDHSK HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI HHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCCCCEEEECCCCH ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KENPWDKEIIEDLKYIVRFCGFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKV CCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCE MIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDLYLGILSMPSEKWIPSYLFYL ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHEE KNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHCCHH KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINN HHHHHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECC ENIFNTFRFYKPKKSTKYICIGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDI CCHHHHHHEECCCCCCCEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHCC PLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTSIPYILMLRSWILYNLYEEIK CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE CCCCCEEHEEHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIV HHEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCEEECCCCHH HNYIGYRKDVLKEFKEFFDYFVKFHNLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKIS CCEEHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC AVDLEIYLHNKNLKAAKIEVDVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIIN EEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH SIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIKIYLKERELSEITPDLIDHSK HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI HHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCCCCEEEECCCCH ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KENPWDKEIIEDLKYIVRFCGFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKV CCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCE MIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDLYLGILSMPSEKWIPSYLFYL ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHEE KNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHCCHH KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINN HHHHHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECC ENIFNTFRFYKPKKSTKYICIGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDI CCHHHHHHEECCCCCCCEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHCC PLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTSIPYILMLRSWILYNLYEEIK CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE CCCCCEEHEEHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIV HHEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCEEECCCCHH HNYIGYRKDVLKEFKEFFDYFVKFHNLQ HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087