| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669739
Identifier: 15669739
GI number: 15669739
Start: 1522462
End: 1523787
Strand: Reverse
Name: 15669739
Synonym: MJ1544
Alternate gene names: NA
Gene position: 1523787-1522462 (Counterclockwise)
Preceding gene: 15669753
Following gene: 15669737
Centisome position: 91.52
GC content: 26.4
Gene sequence:
>1326_bases TTGTCTAATATATTAGACATAAAAATATTAAGAGTGTCAAGTATGATAGACAAAAAGATACTATTTGAAGAAGTTATATT AGACAACTTAGAGATTGCAAAGAAAGCAAAGGTAATTAATAGAGATATTGAAATAAAACTCATCCCTAACAAAATAAAGG TTATCTATGGTGTGAGGAGAGGAGGAAAGACATATTTCTTATTTCAAATTATAAACAAGCATTTTAAGGATGATTTCATC TATATAAATTTTGAGGATGAAAGATTAATAAATATAGCTTTAGATGAGTTAAATGAACTCTTAAAGATTGCATTGTCTAT AAAAAACACAAAAAACCTATTTTTTGATGAGATTCAGAGTGTTGATAATTGGGATAAATTTGTTAGAAGGCTAAATGATA GTGGTTTCAACATTTTTATAACTGGTTCATCTTCTAAATTATTATCAAAAGAAATTGCCACTTCTTTGAGAGGAAGAAAT TTAAAAACTGAAATATTACCATTAAACTTTAAGGAATTTTTGAAATTTAAGAATTTTAATGTTAAGAAGAGGTATTCCAC AATTGAAAAGGCAGAGTTGCTGAAGTATCTAAACGAATTCATTAAATTTGGTGGTTTTCCAGAAATAACTTTAATAGATG ATGAAAACATTAAAAAAGAAATTCTTAAAGAATATTTGGACGGCATATTTTATAGGGATGTTGTTGAGAGGCATAGCATT AGAAATATAAAGGAAATTAAAGTTTTAAGGAACATTTTAATAAATTTATTTGCTAATGAGATTTCTATTAAAAAGATTGC CAATTTACTCAAAGAATTTAATACAAAAATAAGTAGAGAGTGCATTTACAACTATTTAGAGTATTTTAGTGATGCCTATC TAATATTTTTATTAAATAATTTCTCTTATAAGACTAAGACAATATCCTACTCAAAACTCTATGTTATTGACGGAATGTGG AACTTCTCCTTAAGTTTTAGCAAAAATAAAGGAAGAATTTTGGAAAACCTTGTATTTTTGGAGTTGAGAAGGAGAGGTTT TGTTGAGAATGAGAATCTGTTTTATGTCAAAAGGAAAAACTATGAGGTTGATTTTTTAATATTTGGAGAAAATAAGGAGT TAATTCAAGTATGCTATGAATTAAATGAGACCAATAAAGAAAGAGAAATCAAAGCTTATGAAAAGGCAATAAAAGATTTA AAACTTGATAATGTCAATTTAAAAATTATCACTTACAACGATGAAGGATTCGAAAAAATAACAGTTGATGATAAAGAACA TCTGATAGAGATTGTTCCATTCTGGAAGTGGAGTTTAACCTATTGA
Upstream 100 bases:
>100_bases ACAAAATAAAAATAAAATGTCAATATTATATAAAGTTTTTGATTTTGTTGAAATGCATTATGTTTATTGTCGGATATTGT AAAGAGAAGATTTAAATACT
Downstream 100 bases:
>100_bases TATTTTAATAATGTAAAAGACATTTTTAAATTAATAAAATAAAAAAGAGATTAAAAATTATTCCTTCTCCAAGCCACACA TCTTTCTTAACTCTTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSNILDIKILRVSSMIDKKILFEEVILDNLEIAKKAKVINRDIEIKLIPNKIKVIYGVRRGGKTYFLFQIINKHFKDDFI YINFEDERLINIALDELNELLKIALSIKNTKNLFFDEIQSVDNWDKFVRRLNDSGFNIFITGSSSKLLSKEIATSLRGRN LKTEILPLNFKEFLKFKNFNVKKRYSTIEKAELLKYLNEFIKFGGFPEITLIDDENIKKEILKEYLDGIFYRDVVERHSI RNIKEIKVLRNILINLFANEISIKKIANLLKEFNTKISRECIYNYLEYFSDAYLIFLLNNFSYKTKTISYSKLYVIDGMW NFSLSFSKNKGRILENLVFLELRRRGFVENENLFYVKRKNYEVDFLIFGENKELIQVCYELNETNKEREIKAYEKAIKDL KLDNVNLKIITYNDEGFEKITVDDKEHLIEIVPFWKWSLTY
Sequences:
>Translated_441_residues MSNILDIKILRVSSMIDKKILFEEVILDNLEIAKKAKVINRDIEIKLIPNKIKVIYGVRRGGKTYFLFQIINKHFKDDFI YINFEDERLINIALDELNELLKIALSIKNTKNLFFDEIQSVDNWDKFVRRLNDSGFNIFITGSSSKLLSKEIATSLRGRN LKTEILPLNFKEFLKFKNFNVKKRYSTIEKAELLKYLNEFIKFGGFPEITLIDDENIKKEILKEYLDGIFYRDVVERHSI RNIKEIKVLRNILINLFANEISIKKIANLLKEFNTKISRECIYNYLEYFSDAYLIFLLNNFSYKTKTISYSKLYVIDGMW NFSLSFSKNKGRILENLVFLELRRRGFVENENLFYVKRKNYEVDFLIFGENKELIQVCYELNETNKEREIKAYEKAIKDL KLDNVNLKIITYNDEGFEKITVDDKEHLIEIVPFWKWSLTY >Mature_440_residues SNILDIKILRVSSMIDKKILFEEVILDNLEIAKKAKVINRDIEIKLIPNKIKVIYGVRRGGKTYFLFQIINKHFKDDFIY INFEDERLINIALDELNELLKIALSIKNTKNLFFDEIQSVDNWDKFVRRLNDSGFNIFITGSSSKLLSKEIATSLRGRNL KTEILPLNFKEFLKFKNFNVKKRYSTIEKAELLKYLNEFIKFGGFPEITLIDDENIKKEILKEYLDGIFYRDVVERHSIR NIKEIKVLRNILINLFANEISIKKIANLLKEFNTKISRECIYNYLEYFSDAYLIFLLNNFSYKTKTISYSKLYVIDGMWN FSLSFSKNKGRILENLVFLELRRRGFVENENLFYVKRKNYEVDFLIFGENKELIQVCYELNETNKEREIKAYEKAIKDLK LDNVNLKIITYNDEGFEKITVDDKEHLIEIVPFWKWSLTY
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1544_METJA (Q58939)
Other databases:
- EMBL: L77117 - PIR: G64492 - RefSeq: NP_248552.1 - ProteinModelPortal: Q58939 - GeneID: 1452452 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1544 - NMPDR: fig|243232.1.peg.1589 - TIGR: MJ1544 - HOGENOM: HBG552995 - OMA: VIFPLKK - ProtClustDB: CLSK796913 - BioCyc: MJAN243232:MJ_1544-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52564; Mature: 52433
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILDIKILRVSSMIDKKILFEEVILDNLEIAKKAKVINRDIEIKLIPNKIKVIYGVRR CCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCEEEEEEEEEC GGKTYFLFQIINKHFKDDFIYINFEDERLINIALDELNELLKIALSIKNTKNLFFDEIQS CCCEEEHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC VDNWDKFVRRLNDSGFNIFITGSSSKLLSKEIATSLRGRNLKTEILPLNFKEFLKFKNFN CCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC VKKRYSTIEKAELLKYLNEFIKFGGFPEITLIDDENIKKEILKEYLDGIFYRDVVERHSI CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RNIKEIKVLRNILINLFANEISIKKIANLLKEFNTKISRECIYNYLEYFSDAYLIFLLNN CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC FSYKTKTISYSKLYVIDGMWNFSLSFSKNKGRILENLVFLELRRRGFVENENLFYVKRKN CCEEEEEEEEEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC YEVDFLIFGENKELIQVCYELNETNKEREIKAYEKAIKDLKLDNVNLKIITYNDEGFEKI CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEECCCEEEEEEECCCCCEEE TVDDKEHLIEIVPFWKWSLTY EECCHHHEEEEEEEEEEEECC >Mature Secondary Structure SNILDIKILRVSSMIDKKILFEEVILDNLEIAKKAKVINRDIEIKLIPNKIKVIYGVRR CCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCEEEEEEEEEC GGKTYFLFQIINKHFKDDFIYINFEDERLINIALDELNELLKIALSIKNTKNLFFDEIQS CCCEEEHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC VDNWDKFVRRLNDSGFNIFITGSSSKLLSKEIATSLRGRNLKTEILPLNFKEFLKFKNFN CCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC VKKRYSTIEKAELLKYLNEFIKFGGFPEITLIDDENIKKEILKEYLDGIFYRDVVERHSI CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH RNIKEIKVLRNILINLFANEISIKKIANLLKEFNTKISRECIYNYLEYFSDAYLIFLLNN CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC FSYKTKTISYSKLYVIDGMWNFSLSFSKNKGRILENLVFLELRRRGFVENENLFYVKRKN CCEEEEEEEEEEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC YEVDFLIFGENKELIQVCYELNETNKEREIKAYEKAIKDLKLDNVNLKIITYNDEGFEKI CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEECCCEEEEEEECCCCCEEE TVDDKEHLIEIVPFWKWSLTY EECCHHHEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087