| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is mtaD
Identifier: 15669736
GI number: 15669736
Start: 1517461
End: 1518723
Strand: Reverse
Name: mtaD
Synonym: MJ1541
Alternate gene names: 15669736
Gene position: 1518723-1517461 (Counterclockwise)
Preceding gene: 15669737
Following gene: 15669732
Centisome position: 91.22
GC content: 33.65
Gene sequence:
>1263_bases GTGATATTGATAAAAAATGTATTTGTAAATGGGAAGAGACAGGATATACTAATTGAAGGAAATAAAATAAAAAAGATTGG AGAGGTTAAAAAAGAAGAAATAGAGAATGCTGAAATTATAGATGGAAAGAACAAGATAGCAATCCCTGGGTTGATAAATA CTCACACCCACATACCAATGACATTATTCAGAGGAGTTGCTGATGATTTACCTTTAATGGAGTGGTTAAACAACTACATC TGGCCTATGGAGGCAAAGTTAAATGAAGAAATTGTTTATTGGGGAACACTATTAGGATGTATTGAGATGATTAGAAGTGG AACTACTACTTTTAACGATATGTATTTCTTTTTGGAAGGGATTGCTAAGGCAGTTGATGAAAGTGGAATGAGGGCAGTTT TAGCCTACGGAATGATTGATTTATTTGATGAGGAGAGAAGGGAGAGAGAGCTTAAAAATGCTGAGAAGTATATAAACTAC ATAAACAGCTTAAATAATAGTAGAATAATGCCAGCTCTTGGCCCTCATGCTCCATACACTTGCTCCAAAGAGCTTTTAAT GGAAGTTAATAACTTAGCTAAAAAATACAACGTCCCTATACATATACATCTAAATGAAACCTTAGATGAGATTAAAATGG TTAAAGAGAAAACGGGTATGGAGCCGTTTATTTATTTAAACTCCTTTGGTTTCTTTGATGATGTTAGAGCTATAGCCGCT CACTGCGTGCATTTAACAGATGAAGAAATCAAAATAATGAAACAAAAAAACATAAACGTCTCTCATAACCCAATTAGCAA CTTAAAATTAGCTTCTGGAGTAGCTCCAATTCCAAAACTCTTGGCTGAGGGAATAAACGTTACCTTAGGAACTGATGGAT GTGGAAGTAACAACAACTTAAACTTATTTGAGGAGATAAAGGTCTCTGCAATCTTACATAAGGGAGTTAATTTAAATCCA ACTGTTGTTAAAGCTGAAGAGGCGTTTAACTTTGCCACTAAAAATGGGGCTAAAGCATTGAATATAAAAGCTGGAGAAAT AAGAGAAGGATATTTAGCAGATATTGTTTTAATAAACTTGGATAAACCTTACTTGTATCCAAAAGAGAATATAATGTCCC ATTTAGTTTATGCGTTTAATGGCTTTGTAGATGATGTCATCATAGATGGAAATATAGTTATGAGGGATGGAGAGATTTTA ACTGTTGATGAAGAGAAAGTCTATGAAAAAGCTGAAGAAATGTATGAGATTTTGAGAAGCTAA
Upstream 100 bases:
>100_bases ATAACTATATTGGTTACAGAAAAGATGTATTAAAGGAATTCAAAGAATTCTTTGATTACTTTGTTAAATTCCACAATTTA CAGTAATACAAGGTGAAACA
Downstream 100 bases:
>100_bases TTTTTGAATTCATTTAACATTTTTATCAAAGCTAATTTGTCAGTAATTTTTATATTTTTTAGAAATATTCCTCCTCTTGC ATCATAACCAACAATTAAAA
Product: N-ethylammeline chlorohydrolase TrzA
Products: NA
Alternate protein names: MTA/SAH deaminase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MILIKNVFVNGKRQDILIEGNKIKKIGEVKKEEIENAEIIDGKNKIAIPGLINTHTHIPMTLFRGVADDLPLMEWLNNYI WPMEAKLNEEIVYWGTLLGCIEMIRSGTTTFNDMYFFLEGIAKAVDESGMRAVLAYGMIDLFDEERRERELKNAEKYINY INSLNNSRIMPALGPHAPYTCSKELLMEVNNLAKKYNVPIHIHLNETLDEIKMVKEKTGMEPFIYLNSFGFFDDVRAIAA HCVHLTDEEIKIMKQKNINVSHNPISNLKLASGVAPIPKLLAEGINVTLGTDGCGSNNNLNLFEEIKVSAILHKGVNLNP TVVKAEEAFNFATKNGAKALNIKAGEIREGYLADIVLINLDKPYLYPKENIMSHLVYAFNGFVDDVIIDGNIVMRDGEIL TVDEEKVYEKAEEMYEILRS
Sequences:
>Translated_420_residues MILIKNVFVNGKRQDILIEGNKIKKIGEVKKEEIENAEIIDGKNKIAIPGLINTHTHIPMTLFRGVADDLPLMEWLNNYI WPMEAKLNEEIVYWGTLLGCIEMIRSGTTTFNDMYFFLEGIAKAVDESGMRAVLAYGMIDLFDEERRERELKNAEKYINY INSLNNSRIMPALGPHAPYTCSKELLMEVNNLAKKYNVPIHIHLNETLDEIKMVKEKTGMEPFIYLNSFGFFDDVRAIAA HCVHLTDEEIKIMKQKNINVSHNPISNLKLASGVAPIPKLLAEGINVTLGTDGCGSNNNLNLFEEIKVSAILHKGVNLNP TVVKAEEAFNFATKNGAKALNIKAGEIREGYLADIVLINLDKPYLYPKENIMSHLVYAFNGFVDDVIIDGNIVMRDGEIL TVDEEKVYEKAEEMYEILRS >Mature_420_residues MILIKNVFVNGKRQDILIEGNKIKKIGEVKKEEIENAEIIDGKNKIAIPGLINTHTHIPMTLFRGVADDLPLMEWLNNYI WPMEAKLNEEIVYWGTLLGCIEMIRSGTTTFNDMYFFLEGIAKAVDESGMRAVLAYGMIDLFDEERRERELKNAEKYINY INSLNNSRIMPALGPHAPYTCSKELLMEVNNLAKKYNVPIHIHLNETLDEIKMVKEKTGMEPFIYLNSFGFFDDVRAIAA HCVHLTDEEIKIMKQKNINVSHNPISNLKLASGVAPIPKLLAEGINVTLGTDGCGSNNNLNLFEEIKVSAILHKGVNLNP TVVKAEEAFNFATKNGAKALNIKAGEIREGYLADIVLINLDKPYLYPKENIMSHLVYAFNGFVDDVIIDGNIVMRDGEIL TVDEEKVYEKAEEMYEILRS
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family
Homologues:
Organism=Homo sapiens, GI4758426, Length=338, Percent_Identity=28.698224852071, Blast_Score=129, Evalue=4e-30, Organism=Escherichia coli, GI87082177, Length=444, Percent_Identity=25.2252252252252, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1789249, Length=368, Percent_Identity=26.9021739130435, Blast_Score=111, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17540282, Length=403, Percent_Identity=24.317617866005, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319963, Length=337, Percent_Identity=26.1127596439169, Blast_Score=114, Evalue=3e-26, Organism=Drosophila melanogaster, GI24643849, Length=357, Percent_Identity=29.1316526610644, Blast_Score=152, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTAD_METJA (Q58936)
Other databases:
- EMBL: L77117 - PIR: D64492 - RefSeq: NP_248549.1 - ProteinModelPortal: Q58936 - SMR: Q58936 - GeneID: 1452449 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1541 - NMPDR: fig|243232.1.peg.1586 - TIGR: MJ1541 - HOGENOM: HBG668170 - OMA: KENIESH - ProtClustDB: CLSK876616 - BioCyc: MJAN243232:MJ_1541-MONOMER - BRENDA: 3.5.4.28 - HAMAP: MF_01281 - InterPro: IPR006680 - InterPro: IPR011059
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.28
Molecular weight: Translated: 47469; Mature: 47469
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: BINDING 84-84 BINDING 176-176 BINDING 206-206 BINDING 292-292
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIKNVFVNGKRQDILIEGNKIKKIGEVKKEEIENAEIIDGKNKIAIPGLINTHTHIPM CEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCCEEECCEECCCCCCHH TLFRGVADDLPLMEWLNNYIWPMEAKLNEEIVYWGTLLGCIEMIRSGTTTFNDMYFFLEG HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAKAVDESGMRAVLAYGMIDLFDEERRERELKNAEKYINYINSLNNSRIMPALGPHAPYT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC CSKELLMEVNNLAKKYNVPIHIHLNETLDEIKMVKEKTGMEPFIYLNSFGFFDDVRAIAA CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH HCVHLTDEEIKIMKQKNINVSHNPISNLKLASGVAPIPKLLAEGINVTLGTDGCGSNNNL HHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCEEEECCCCCCCCCCC NLFEEIKVSAILHKGVNLNPTVVKAEEAFNFATKNGAKALNIKAGEIREGYLADIVLINL CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEC DKPYLYPKENIMSHLVYAFNGFVDDVIIDGNIVMRDGEILTVDEEKVYEKAEEMYEILRS CCCCCCCHHHHHHHHHHHHHCCCCCEEECCEEEEECCCEEEECHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILIKNVFVNGKRQDILIEGNKIKKIGEVKKEEIENAEIIDGKNKIAIPGLINTHTHIPM CEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCCEEECCEECCCCCCHH TLFRGVADDLPLMEWLNNYIWPMEAKLNEEIVYWGTLLGCIEMIRSGTTTFNDMYFFLEG HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH IAKAVDESGMRAVLAYGMIDLFDEERRERELKNAEKYINYINSLNNSRIMPALGPHAPYT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC CSKELLMEVNNLAKKYNVPIHIHLNETLDEIKMVKEKTGMEPFIYLNSFGFFDDVRAIAA CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH HCVHLTDEEIKIMKQKNINVSHNPISNLKLASGVAPIPKLLAEGINVTLGTDGCGSNNNL HHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCEEEECCCCCCCCCCC NLFEEIKVSAILHKGVNLNPTVVKAEEAFNFATKNGAKALNIKAGEIREGYLADIVLINL CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEC DKPYLYPKENIMSHLVYAFNGFVDDVIIDGNIVMRDGEILTVDEEKVYEKAEEMYEILRS CCCCCCCHHHHHHHHHHHHHCCCCCEEECCEEEEECCCEEEECHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087