| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669604
Identifier: 15669604
GI number: 15669604
Start: 1375086
End: 1375811
Strand: Reverse
Name: 15669604
Synonym: MJ1414
Alternate gene names: NA
Gene position: 1375811-1375086 (Counterclockwise)
Preceding gene: 15669606
Following gene: 15669603
Centisome position: 82.63
GC content: 27.13
Gene sequence:
>726_bases GTGTCACCTATGAGGTGGGCAATATTTTTGGTTTTATTAACTATAACATTCAGCGGTTGTTTAAATAAAGAGATAAGTAA GGAAGAGATAATTAAAAAGATTGATGAAATTAACACATTTTCTTATAACGCAAAAGTGTTTATAAACCTTAGTGTTTCAA ATCCAGCAATAAATAAGGTTAATATGAAAATGGATATTGACGGATACAGTGATGGAAAGTTATCAAAAGGGATTATACAT GTTTATTATACAGTTAGATACTTTAATGGTAGGAATGAGACAATTCCTTTTTATGTAAATGAGGAAGGAACGTTTATAAA ATTAGAGGGAAAATGGCAGAAAATAACAAATAATGATTTAAGCAATCACACGTGGAATATATTAGCTTATATAAAAGACT TAATTGAAAAAAATGACATAAAAATTGAGGAAGAAAACAATCATTATATTATAAGGTTAAAGGATGAAAATGCTGAAAAA CAATTAAATCCTTTCTTCTACAGAGGGATAAAAATCCCAGGAATAAATCTAAAAATCTCTGAAGAGGAAGTAGTTATTAT ATTAGATAAGTATGGAACTCCAATAAAAGTTATTAAAAAAGGAAAATTGTATGGAACTTCAAGTAAAGGAAACTTAGATG GAGTTATAGTTATAGAAACGGAGATTAAAGATATCAACAAAGATTTTGACTTCTCAATACCAGAAGATTTAAGTATATAT AACTAA
Upstream 100 bases:
>100_bases GAGTTTCCCATGGTGTTAATTCCATTAGTTTCACCCTTCATTTTGATATAAAGATTTAAATACATCAGTTGTAATATATT TATTATGTATTCTCTTTAAG
Downstream 100 bases:
>100_bases CATAGGTTATTAACATCATTATTTAGTTTTATTAACTTATTTGTTTTTGGGTGGGTGGGATGATAACTACCACAACTCCT TATATTGAAGGAAAAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSPMRWAIFLVLLTITFSGCLNKEISKEEIIKKIDEINTFSYNAKVFINLSVSNPAINKVNMKMDIDGYSDGKLSKGIIH VYYTVRYFNGRNETIPFYVNEEGTFIKLEGKWQKITNNDLSNHTWNILAYIKDLIEKNDIKIEEENNHYIIRLKDENAEK QLNPFFYRGIKIPGINLKISEEEVVIILDKYGTPIKVIKKGKLYGTSSKGNLDGVIVIETEIKDINKDFDFSIPEDLSIY N
Sequences:
>Translated_241_residues MSPMRWAIFLVLLTITFSGCLNKEISKEEIIKKIDEINTFSYNAKVFINLSVSNPAINKVNMKMDIDGYSDGKLSKGIIH VYYTVRYFNGRNETIPFYVNEEGTFIKLEGKWQKITNNDLSNHTWNILAYIKDLIEKNDIKIEEENNHYIIRLKDENAEK QLNPFFYRGIKIPGINLKISEEEVVIILDKYGTPIKVIKKGKLYGTSSKGNLDGVIVIETEIKDINKDFDFSIPEDLSIY N >Mature_240_residues SPMRWAIFLVLLTITFSGCLNKEISKEEIIKKIDEINTFSYNAKVFINLSVSNPAINKVNMKMDIDGYSDGKLSKGIIHV YYTVRYFNGRNETIPFYVNEEGTFIKLEGKWQKITNNDLSNHTWNILAYIKDLIEKNDIKIEEENNHYIIRLKDENAEKQ LNPFFYRGIKIPGINLKISEEEVVIILDKYGTPIKVIKKGKLYGTSSKGNLDGVIVIETEIKDINKDFDFSIPEDLSIYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1414_METJA (Q58809)
Other databases:
- EMBL: L77117 - PIR: E64476 - RefSeq: NP_248417.1 - ProteinModelPortal: Q58809 - GeneID: 1452317 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1414 - NMPDR: fig|243232.1.peg.1454 - TIGR: MJ1414 - ProtClustDB: CLSK2749988 - BioCyc: MJAN243232:MJ_1414-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27861; Mature: 27730
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMRWAIFLVLLTITFSGCLNKEISKEEIIKKIDEINTFSYNAKVFINLSVSNPAINKV CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECEEEEEEEEECCCCCEEE NMKMDIDGYSDGKLSKGIIHVYYTVRYFNGRNETIPFYVNEEGTFIKLEGKWQKITNNDL EEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCEEEECCCCC SNHTWNILAYIKDLIEKNDIKIEEENNHYIIRLKDENAEKQLNPFFYRGIKIPGINLKIS CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCHHCCCCCCCCEECCCCEEEEC EEEVVIILDKYGTPIKVIKKGKLYGTSSKGNLDGVIVIETEIKDINKDFDFSIPEDLSIY CCEEEEEEECCCCCEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC N C >Mature Secondary Structure SPMRWAIFLVLLTITFSGCLNKEISKEEIIKKIDEINTFSYNAKVFINLSVSNPAINKV CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECEEEEEEEEECCCCCEEE NMKMDIDGYSDGKLSKGIIHVYYTVRYFNGRNETIPFYVNEEGTFIKLEGKWQKITNNDL EEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCEEEECCCCC SNHTWNILAYIKDLIEKNDIKIEEENNHYIIRLKDENAEKQLNPFFYRGIKIPGINLKIS CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCHHCCCCCCCCEECCCCEEEEC EEEVVIILDKYGTPIKVIKKGKLYGTSSKGNLDGVIVIETEIKDINKDFDFSIPEDLSIY CCEEEEEEECCCCCEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087