Click here to switch to the map view.

The map label for this gene is 15669606

Identifier: 15669606

GI number: 15669606

Start: 1376987

End: 1378345

Strand: Reverse

Name: 15669606

Synonym: MJ1416

Alternate gene names: NA

Gene position: 1378345-1376987 (Counterclockwise)

Preceding gene: 15669610

Following gene: 15669604

Centisome position: 82.78

GC content: 35.61

Gene sequence:

>1359_bases
ATGATGGATTTAGAAGGATATGTTAGAAGATGCCTAAGAAAAAAAATCCCAGAAAATAAGATTATTGAGGATGGGTTTAA
GAGAATTTTAGAGATTAAAGAAGATGTAGATGAGGAGTTTGCAAAAAAGTTTATAAAGGCAATTTTAGAGGAGGTAAAGA
CAACTGAAAAATTTAGAGAGATTGATGATGAGAATTTAAAAACTCTACTAAAATATCCAAAATCTGGAGTAACAATGGGA
AGAATGGGAGTTGGTAGTAGAGGAGAAGGAGATTTCTTTGTTCATAGAGAAATAGCAAGGATTGTTAAAAGCACTAAAGT
TAAAGCCTATGTTTCAGCTGAAGAGCAAGATGATGCAGGGATTGTTAGAGCTGATGCTAAATACATAGTTGCGGCAATAG
ATGGAACTCACTCAAGGCTTAGTGATTTCCCATTTTTAGGAGGTTTTCATGTAACAAGAGCTGCTTTAAGAGATATCTAT
GTCATGGGAGCTGAGGCGGTTGCTTTAATTAGTGATGTGCATTTAGCTGATGATGGAGATGTAGGGAAGATATTTGACTT
CACAGCTGGAATTTGTGCTGTTTCTGAGGCTGTTAATGTTCCTTTAATAGGAGGAAGCACGCTGAGAGTTGGAGGGGATA
TGGTAATTGGAGATAGGTTGGTTAGTGCTGTTGGTGCAATAGGAGTTATTAAAGAGGGAGAACCAACAGCAAGAAGAAAC
GCTGAAGTTGGAGATGTTATTTTGATGACAGAGGGTAGTGGAGGAGGGACGATAACAACAACTGCCCTGTATTATGGATG
GTTTGACGTGATTTATGAAACTTTAAATGTGGATTTTATAAAGGCATGTCAGAATTTGATTAGAAGCGGTTTAATTAAAA
AGATTCACGCAATGACAGATGTCACAAATGGCGGTTTAAGAGGAGATGCTTATGAAATTTCAAAAACAGCTAAGGTCTCT
TTAATATTTGATAAAGAGAAGGTTTATAAAACAATCAATCCAAAGGTTTTAGAGATGCTTGAGGTATTGAATATAGACCC
ATTAGGAGTTTCAACAGATTCTTTAATGATTATCTGCCCTGAAGAGTATGCTGATGATATAAAAAAGGTTACTGGAGCTA
TAGAAGTTGGATATGTTGAGGAGGGAGAGGAGAGTTATTTAGTTGATGGAAATAAAAAAATCCCATTAAAACCAATGTTT
AGAGAATCCGCATATACGCCAGTTAAAAAGGTTGTTGGTGAGAGAAAACCTGGAGATTTTGAGGAGATGAAGGAGAAAGT
TAGGAGAGCATGTGATGAAGCTATTAAAAAGAAAGATTTTGTTGTTGAATTGTTAAAAGAGAGAAAAAAGAAATTTTAA

Upstream 100 bases:

>100_bases
TTGACATATATAAATCTTTTAAATTTTTAGTTACTATTAAAAGGAAGATGCCTTATCATAATATCATAATCTTATATTTA
TAATTTTTAGTTATGGTGAT

Downstream 100 bases:

>100_bases
TACTTTCCTTCCAAGATTTTTACAGCAATTTCCTTTGCTTGCTCTCTCTTCTCCTTCAAATCTTTTAAAAACTCTACAAC
TCTTTCATAAGCCATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MMDLEGYVRRCLRKKIPENKIIEDGFKRILEIKEDVDEEFAKKFIKAILEEVKTTEKFREIDDENLKTLLKYPKSGVTMG
RMGVGSRGEGDFFVHREIARIVKSTKVKAYVSAEEQDDAGIVRADAKYIVAAIDGTHSRLSDFPFLGGFHVTRAALRDIY
VMGAEAVALISDVHLADDGDVGKIFDFTAGICAVSEAVNVPLIGGSTLRVGGDMVIGDRLVSAVGAIGVIKEGEPTARRN
AEVGDVILMTEGSGGGTITTTALYYGWFDVIYETLNVDFIKACQNLIRSGLIKKIHAMTDVTNGGLRGDAYEISKTAKVS
LIFDKEKVYKTINPKVLEMLEVLNIDPLGVSTDSLMIICPEEYADDIKKVTGAIEVGYVEEGEESYLVDGNKKIPLKPMF
RESAYTPVKKVVGERKPGDFEEMKEKVRRACDEAIKKKDFVVELLKERKKKF

Sequences:

>Translated_452_residues
MMDLEGYVRRCLRKKIPENKIIEDGFKRILEIKEDVDEEFAKKFIKAILEEVKTTEKFREIDDENLKTLLKYPKSGVTMG
RMGVGSRGEGDFFVHREIARIVKSTKVKAYVSAEEQDDAGIVRADAKYIVAAIDGTHSRLSDFPFLGGFHVTRAALRDIY
VMGAEAVALISDVHLADDGDVGKIFDFTAGICAVSEAVNVPLIGGSTLRVGGDMVIGDRLVSAVGAIGVIKEGEPTARRN
AEVGDVILMTEGSGGGTITTTALYYGWFDVIYETLNVDFIKACQNLIRSGLIKKIHAMTDVTNGGLRGDAYEISKTAKVS
LIFDKEKVYKTINPKVLEMLEVLNIDPLGVSTDSLMIICPEEYADDIKKVTGAIEVGYVEEGEESYLVDGNKKIPLKPMF
RESAYTPVKKVVGERKPGDFEEMKEKVRRACDEAIKKKDFVVELLKERKKKF
>Mature_452_residues
MMDLEGYVRRCLRKKIPENKIIEDGFKRILEIKEDVDEEFAKKFIKAILEEVKTTEKFREIDDENLKTLLKYPKSGVTMG
RMGVGSRGEGDFFVHREIARIVKSTKVKAYVSAEEQDDAGIVRADAKYIVAAIDGTHSRLSDFPFLGGFHVTRAALRDIY
VMGAEAVALISDVHLADDGDVGKIFDFTAGICAVSEAVNVPLIGGSTLRVGGDMVIGDRLVSAVGAIGVIKEGEPTARRN
AEVGDVILMTEGSGGGTITTTALYYGWFDVIYETLNVDFIKACQNLIRSGLIKKIHAMTDVTNGGLRGDAYEISKTAKVS
LIFDKEKVYKTINPKVLEMLEVLNIDPLGVSTDSLMIICPEEYADDIKKVTGAIEVGYVEEGEESYLVDGNKKIPLKPMF
RESAYTPVKKVVGERKPGDFEEMKEKVRRACDEAIKKKDFVVELLKERKKKF

Specific function: Unknown

COG id: COG1973

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1416_METJA (Q58811)

Other databases:

- EMBL:   L77117
- PIR:   G64476
- RefSeq:   NP_248419.1
- ProteinModelPortal:   Q58811
- SMR:   Q58811
- GeneID:   1452319
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1416
- NMPDR:   fig|243232.1.peg.1456
- TIGR:   MJ1416
- HOGENOM:   HBG508948
- OMA:   LRIGGDM
- ProtClustDB:   CLSK862780
- BioCyc:   MJAN243232:MJ_1416-MONOMER
- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR009186
- InterPro:   IPR016188
- PIRSF:   PIRSF006346

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like

EC number: NA

Molecular weight: Translated: 50076; Mature: 50076

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDLEGYVRRCLRKKIPENKIIEDGFKRILEIKEDVDEEFAKKFIKAILEEVKTTEKFRE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDENLKTLLKYPKSGVTMGRMGVGSRGEGDFFVHREIARIVKSTKVKAYVSAEEQDDAG
CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCC
IVRADAKYIVAAIDGTHSRLSDFPFLGGFHVTRAALRDIYVMGAEAVALISDVHLADDGD
EEEECCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCEECCCCC
VGKIFDFTAGICAVSEAVNVPLIGGSTLRVGGDMVIGDRLVSAVGAIGVIKEGEPTARRN
CCHHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEHHHHHHHHHHHHHEEECCCCCHHCC
AEVGDVILMTEGSGGGTITTTALYYGWFDVIYETLNVDFIKACQNLIRSGLIKKIHAMTD
CCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VTNGGLRGDAYEISKTAKVSLIFDKEKVYKTINPKVLEMLEVLNIDPLGVSTDSLMIICP
CCCCCCCCCCEECCCCEEEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEC
EEYADDIKKVTGAIEVGYVEEGEESYLVDGNKKIPLKPMFRESAYTPVKKVVGERKPGDF
HHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCH
EEMKEKVRRACDEAIKKKDFVVELLKERKKKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDLEGYVRRCLRKKIPENKIIEDGFKRILEIKEDVDEEFAKKFIKAILEEVKTTEKFRE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDENLKTLLKYPKSGVTMGRMGVGSRGEGDFFVHREIARIVKSTKVKAYVSAEEQDDAG
CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCC
IVRADAKYIVAAIDGTHSRLSDFPFLGGFHVTRAALRDIYVMGAEAVALISDVHLADDGD
EEEECCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCEECCCCC
VGKIFDFTAGICAVSEAVNVPLIGGSTLRVGGDMVIGDRLVSAVGAIGVIKEGEPTARRN
CCHHHHHHHHHHHHHHHCCCEEECCCEEEECCCEEHHHHHHHHHHHHHEEECCCCCHHCC
AEVGDVILMTEGSGGGTITTTALYYGWFDVIYETLNVDFIKACQNLIRSGLIKKIHAMTD
CCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VTNGGLRGDAYEISKTAKVSLIFDKEKVYKTINPKVLEMLEVLNIDPLGVSTDSLMIICP
CCCCCCCCCCEECCCCEEEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEC
EEYADDIKKVTGAIEVGYVEEGEESYLVDGNKKIPLKPMFRESAYTPVKKVVGERKPGDF
HHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCH
EEMKEKVRRACDEAIKKKDFVVELLKERKKKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087