| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is ybjQ [C]
Identifier: 15669603
GI number: 15669603
Start: 1374724
End: 1375035
Strand: Reverse
Name: ybjQ [C]
Synonym: MJ1413
Alternate gene names: 15669603
Gene position: 1375035-1374724 (Counterclockwise)
Preceding gene: 15669604
Following gene: 15669600
Centisome position: 82.59
GC content: 36.86
Gene sequence:
>312_bases GTGGGTGGGATGATAACTACCACAACTCCTTATATTGAAGGAAAAAAGATAATCAAATATTTGGGCTTTGTGCATGGGGT TGCATCAGTTTATGTTACTGTTAAGTATTATGAAGATGTTAAAGATGCGTATGAAAGGGCATTAAGGGAGTCGGAGGATA CTGCCCTAATTAGAATGGTAGATAATGCAAAGAAATTAGGAGCTAATGCAATTATTGGGATTAACTCAAATTATGCAATG GTTGGAGAAAAAGGAGACATGATAATGGTTGGCATCTATGGAACTGCGGTTGTTGTTGAAGAAGATGGATAA
Upstream 100 bases:
>100_bases ACAAAGATTTTGACTTCTCAATACCAGAAGATTTAAGTATATATAACTAACATAGGTTATTAACATCATTATTTAGTTTT ATTAACTTATTTGTTTTTGG
Downstream 100 bases:
>100_bases TAAAATTAAAAAAATTAAAGAATTACTTTTTTAGCAATACATAAACATCATCTCCAGTTTTTACATTTTTTAAATACTCT GCATTTTCAACTATTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAM VGEKGDMIMVGIYGTAVVVEEDG
Sequences:
>Translated_103_residues MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAM VGEKGDMIMVGIYGTAVVVEEDG >Mature_102_residues GGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAMV GEKGDMIMVGIYGTAVVVEEDG
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=103, Percent_Identity=35.9223300970874, Blast_Score=70, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1413_METJA (Q58808)
Other databases:
- EMBL: L77117 - PIR: D64476 - RefSeq: NP_248416.1 - ProteinModelPortal: Q58808 - SMR: Q58808 - GeneID: 1452316 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1413 - NMPDR: fig|243232.1.peg.1453 - TIGR: MJ1413 - HOGENOM: HBG339160 - OMA: RESEDTA - BioCyc: MJAN243232:MJ_1413-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11233; Mature: 11102
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMV CCCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCEEEEEE DNAKKLGANAIIGINSNYAMVGEKGDMIMVGIYGTAVVVEEDG CCHHHCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEEECCC >Mature Secondary Structure GGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMV CCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCEEEEEE DNAKKLGANAIIGINSNYAMVGEKGDMIMVGIYGTAVVVEEDG CCHHHCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087