Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is ybjQ [C]

Identifier: 15669603

GI number: 15669603

Start: 1374724

End: 1375035

Strand: Reverse

Name: ybjQ [C]

Synonym: MJ1413

Alternate gene names: 15669603

Gene position: 1375035-1374724 (Counterclockwise)

Preceding gene: 15669604

Following gene: 15669600

Centisome position: 82.59

GC content: 36.86

Gene sequence:

>312_bases
GTGGGTGGGATGATAACTACCACAACTCCTTATATTGAAGGAAAAAAGATAATCAAATATTTGGGCTTTGTGCATGGGGT
TGCATCAGTTTATGTTACTGTTAAGTATTATGAAGATGTTAAAGATGCGTATGAAAGGGCATTAAGGGAGTCGGAGGATA
CTGCCCTAATTAGAATGGTAGATAATGCAAAGAAATTAGGAGCTAATGCAATTATTGGGATTAACTCAAATTATGCAATG
GTTGGAGAAAAAGGAGACATGATAATGGTTGGCATCTATGGAACTGCGGTTGTTGTTGAAGAAGATGGATAA

Upstream 100 bases:

>100_bases
ACAAAGATTTTGACTTCTCAATACCAGAAGATTTAAGTATATATAACTAACATAGGTTATTAACATCATTATTTAGTTTT
ATTAACTTATTTGTTTTTGG

Downstream 100 bases:

>100_bases
TAAAATTAAAAAAATTAAAGAATTACTTTTTTAGCAATACATAAACATCATCTCCAGTTTTTACATTTTTTAAATACTCT
GCATTTTCAACTATTCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAM
VGEKGDMIMVGIYGTAVVVEEDG

Sequences:

>Translated_103_residues
MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAM
VGEKGDMIMVGIYGTAVVVEEDG
>Mature_102_residues
GGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMVDNAKKLGANAIIGINSNYAMV
GEKGDMIMVGIYGTAVVVEEDG

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=103, Percent_Identity=35.9223300970874, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1413_METJA (Q58808)

Other databases:

- EMBL:   L77117
- PIR:   D64476
- RefSeq:   NP_248416.1
- ProteinModelPortal:   Q58808
- SMR:   Q58808
- GeneID:   1452316
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1413
- NMPDR:   fig|243232.1.peg.1453
- TIGR:   MJ1413
- HOGENOM:   HBG339160
- OMA:   RESEDTA
- BioCyc:   MJAN243232:MJ_1413-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 11233; Mature: 11102

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMV
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCEEEEEE
DNAKKLGANAIIGINSNYAMVGEKGDMIMVGIYGTAVVVEEDG
CCHHHCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEEECCC
>Mature Secondary Structure 
GGMITTTTPYIEGKKIIKYLGFVHGVASVYVTVKYYEDVKDAYERALRESEDTALIRMV
CCEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCEEEEEE
DNAKKLGANAIIGINSNYAMVGEKGDMIMVGIYGTAVVVEEDG
CCHHHCCCEEEEEECCCEEEEECCCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087