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The map label for this gene is yhaM [C]

Identifier: 15669214

GI number: 15669214

Start: 955747

End: 956913

Strand: Reverse

Name: yhaM [C]

Synonym: MJ1025

Alternate gene names: 15669214

Gene position: 956913-955747 (Counterclockwise)

Preceding gene: 161579523

Following gene: 15669211

Centisome position: 57.47

GC content: 30.51

Gene sequence:

>1167_bases
GTGGTGTCTATTATGAACAAAAATGAATTAATAACTGAAATTTTAAAAAATGAGGTAGTTAAGGCGTTAGGTTGCACAGA
AGTTGGATTAATTGGTTATACTGTCGCTAAGGCAAAACCAGAGGATTTGTATTCAATAAAAGAGATTAAATTAATCTTAG
ATAAGGGAACTTTTAAAAATGCCTTTTCAGTTGGTGTTCCTAACACTAATAAATTTGGAATATTGCCAGCAGTTGTTGGT
GGTTTGTTAGGAAGGGAAGAGAATAAGCTTGAAGTATTCAAAGACATAAAATATGATGAGAAATTAGAAGAATTCATTGA
AAATAAGTTAAAAATAGAAGTAATTGATTCAGACGTTTATTGTAAAGTAATTATAAAAGCTAATAAAGTATATGAGGCAG
AAACAAAAGGGAGTCATTCTGGAAAATCTCTATCTGATGATTTAAAAAATGCATACAAAAGCCTAACTCTTAAAGATTTC
ATTGATTATATTGAAGATATTCCTGAAGAAGTTATTAAAATTATTAAAGAAACAATAGAAACTAACAAAAACCTCTCAAC
GCCAGAAGTTCCAGAAGATTTTATTAGCTTAGATTTAAAGGATGAAATTCTAAATCATATGCTTAAAAAAACAGTTTCAG
CAGTTTATAATAGAATGATAGGTATCAATAAACCAGCCATGGCTATTGCTGGTAGTGGAAATATGGGATTAACAGCTACT
TTACCAATAATCGCCTATGATGAAATAAAAGGGCATGATGAAGAGAAATTGACAAAATCTATAACTCTATCAGCTTTAAC
AACTATATATTCAGCATATCATTCATCCTACATCTCAGCAATGTGTGGATGTGTAAATAGAGGAGGAATTGGAGCTGTTT
CTGGTTTATCCTATTATATATTTGGATTTGATAGAATTGAAGAAAGTATTAAAAGCTTTACAGCAAACCTTCCAGGAATC
GTTTGTGACGGAGGAAAAATTGGCTGTGCTTTAAAGATAGCTTCTGGTGTCTTTGCTATATATTTATCTTTATTCTCCAA
AGTGCCATATACAAATGGAATTGTCGGAAAGGACTTTAAAGAATGCATAGAGAATATTGGAAAAATTGGGAAAGCAATGA
AACCAGTAGATGATGAGATAATAGAGATTTTGAAAAACAAGAAATAA

Upstream 100 bases:

>100_bases
GATGAGAGAAGAAATTCCATCAAAAGAAGAAAAGGCATGTTCAATTTGTGGGGATTACTGCGCTTTGTTAATGGTTGAAG
AGTTAGGAAAGAGATAAAAT

Downstream 100 bases:

>100_bases
TTATTTTTTAAAGATAATTTTTATAACTCTTTTTAATGTTAGATTTTCTTCATACAGCAAAACACCAATTTTAAACAGCT
TAATTGATAAGATAAAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MVSIMNKNELITEILKNEVVKALGCTEVGLIGYTVAKAKPEDLYSIKEIKLILDKGTFKNAFSVGVPNTNKFGILPAVVG
GLLGREENKLEVFKDIKYDEKLEEFIENKLKIEVIDSDVYCKVIIKANKVYEAETKGSHSGKSLSDDLKNAYKSLTLKDF
IDYIEDIPEEVIKIIKETIETNKNLSTPEVPEDFISLDLKDEILNHMLKKTVSAVYNRMIGINKPAMAIAGSGNMGLTAT
LPIIAYDEIKGHDEEKLTKSITLSALTTIYSAYHSSYISAMCGCVNRGGIGAVSGLSYYIFGFDRIEESIKSFTANLPGI
VCDGGKIGCALKIASGVFAIYLSLFSKVPYTNGIVGKDFKECIENIGKIGKAMKPVDDEIIEILKNKK

Sequences:

>Translated_388_residues
MVSIMNKNELITEILKNEVVKALGCTEVGLIGYTVAKAKPEDLYSIKEIKLILDKGTFKNAFSVGVPNTNKFGILPAVVG
GLLGREENKLEVFKDIKYDEKLEEFIENKLKIEVIDSDVYCKVIIKANKVYEAETKGSHSGKSLSDDLKNAYKSLTLKDF
IDYIEDIPEEVIKIIKETIETNKNLSTPEVPEDFISLDLKDEILNHMLKKTVSAVYNRMIGINKPAMAIAGSGNMGLTAT
LPIIAYDEIKGHDEEKLTKSITLSALTTIYSAYHSSYISAMCGCVNRGGIGAVSGLSYYIFGFDRIEESIKSFTANLPGI
VCDGGKIGCALKIASGVFAIYLSLFSKVPYTNGIVGKDFKECIENIGKIGKAMKPVDDEIIEILKNKK
>Mature_388_residues
MVSIMNKNELITEILKNEVVKALGCTEVGLIGYTVAKAKPEDLYSIKEIKLILDKGTFKNAFSVGVPNTNKFGILPAVVG
GLLGREENKLEVFKDIKYDEKLEEFIENKLKIEVIDSDVYCKVIIKANKVYEAETKGSHSGKSLSDDLKNAYKSLTLKDF
IDYIEDIPEEVIKIIKETIETNKNLSTPEVPEDFISLDLKDEILNHMLKKTVSAVYNRMIGINKPAMAIAGSGNMGLTAT
LPIIAYDEIKGHDEEKLTKSITLSALTTIYSAYHSSYISAMCGCVNRGGIGAVSGLSYYIFGFDRIEESIKSFTANLPGI
VCDGGKIGCALKIASGVFAIYLSLFSKVPYTNGIVGKDFKECIENIGKIGKAMKPVDDEIIEILKNKK

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=421, Percent_Identity=24.7030878859857, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1025_METJA (Q58431)

Other databases:

- EMBL:   L77117
- PIR:   H64427
- RefSeq:   NP_248019.1
- ProteinModelPortal:   Q58431
- GeneID:   1451922
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1025
- NMPDR:   fig|243232.1.peg.1056
- TIGR:   MJ1025
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- ProtClustDB:   CLSK876430
- BioCyc:   MJAN243232:MJ_1025-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 42645; Mature: 42645

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIMNKNELITEILKNEVVKALGCTEVGLIGYTVAKAKPEDLYSIKEIKLILDKGTFKN
CCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
AFSVGVPNTNKFGILPAVVGGLLGREENKLEVFKDIKYDEKLEEFIENKLKIEVIDSDVY
CEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCE
CKVIIKANKVYEAETKGSHSGKSLSDDLKNAYKSLTLKDFIDYIEDIPEEVIKIIKETIE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TNKNLSTPEVPEDFISLDLKDEILNHMLKKTVSAVYNRMIGINKPAMAIAGSGNMGLTAT
CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEE
LPIIAYDEIKGHDEEKLTKSITLSALTTIYSAYHSSYISAMCGCVNRGGIGAVSGLSYYI
ECEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHEE
FGFDRIEESIKSFTANLPGIVCDGGKIGCALKIASGVFAIYLSLFSKVPYTNGIVGKDFK
HHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ECIENIGKIGKAMKPVDDEIIEILKNKK
HHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MVSIMNKNELITEILKNEVVKALGCTEVGLIGYTVAKAKPEDLYSIKEIKLILDKGTFKN
CCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
AFSVGVPNTNKFGILPAVVGGLLGREENKLEVFKDIKYDEKLEEFIENKLKIEVIDSDVY
CEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCE
CKVIIKANKVYEAETKGSHSGKSLSDDLKNAYKSLTLKDFIDYIEDIPEEVIKIIKETIE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TNKNLSTPEVPEDFISLDLKDEILNHMLKKTVSAVYNRMIGINKPAMAIAGSGNMGLTAT
CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEE
LPIIAYDEIKGHDEEKLTKSITLSALTTIYSAYHSSYISAMCGCVNRGGIGAVSGLSYYI
ECEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHEE
FGFDRIEESIKSFTANLPGIVCDGGKIGCALKIASGVFAIYLSLFSKVPYTNGIVGKDFK
HHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ECIENIGKIGKAMKPVDDEIIEILKNKK
HHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087