| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669211
Identifier: 15669211
GI number: 15669211
Start: 951964
End: 953673
Strand: Reverse
Name: 15669211
Synonym: MJ1022
Alternate gene names: NA
Gene position: 953673-951964 (Counterclockwise)
Preceding gene: 15669214
Following gene: 15669210
Centisome position: 57.28
GC content: 30.58
Gene sequence:
>1710_bases ATGCTCGAACCAATTGCCTATGATATTGGAAGACTGTGCAAAGAGGAAGATAAAGAACTAACCCCTAAGCTAATTGACAT TGATGTCATAGGACTTTCGCAGGAAAAAATTTTTTATGGTATAATGACACCTTTTAGGTGTCCAAATTCCAAATCCATAT ATGAACTGCGAAAGTCCTATGTTAAAGCTGATGGCATAAAGATGCCTTTTGATACATTTAGAGAACTAACCTCAATATTT AAAAAATCTTTTATTGGAACTGTTAAATATAAGGGTAATGTATTTAAATATCAAATACTAAACTTTGGTAAGCACGTTGA TTTAATTGAATTGGAAGATGCTGATTTATATATCATAGCAGATGGTAGAAGGTTGATAGAAAGAAAAGAACTTCAAATAA TACCAAAAATTAGAGAAAAAATATCTCCAAACTCAGCTATTTACTCCCCAGCTGTATTTCCTTGGGAAATTCCACTATTG GCTTATATAGGCGTTGATTACTTTGATGACTCATTAGCTAAGTTATATGCATCAATGGGCTACAAATTTACAAAAAATAG GGCTGTAAAGGTAGATAGCTTTAGTTTTGAGGAATTATATAATAACAATAAAAAAGTTTATGAGGAAATCTTAGAAGAAG TTAGGATAGCTATAAAAAATGGATTTCTAAGAAATGTTGTTGAAGAAACAGCTGTATCTCATCCATATTTGTGGGCAAAT TATAGAAGATATGAGCCAGATTTAAGAAACATCCCGTTATCAAAAGAAAATAAGATTATTGTAACAACCAACATTAATAT TCCAGAGGTTAAAAAATATTTGGAAAGATTAGATAACTATGAGCCGTATTCAAACATTATAGTTTTATTACCTTGCTCAT CAAAAAAGCCCTACTCAATTTCCCAATCTCACCAAAAATTTATAAAGGCGATAAAATCTGCAAAAGTTGTTGTTGAGGAA GTTATATTAACATCTCCCTACGGATTAGTGCCGAGAGCTTTGGAAAGGTTAGTCAATTATGACATTCCAGTAACTGGAGA ATGGAGTTTTGAAGAGATAGAGCTTATAAACAACTGTTTAAAAAACTTCTTAAAGAAGGTTAAGGAGAAATTTGATGATT ATATTGTTATAGCTCATCTTCCAGAACACTACCTTGAGATTTTGGAGTTGGATGATATTGTTATTACATCAAAAGGAAAT CCAACATCAGAAGAAGCTTTAAAAAATTTAACTGACACACTAAAAAAGTATAAAGAACTAACAAAAAGTAAAGATATAAA TAAAAAGGGACAAAGAATTCATAATATTCAGCAACTTGCAGAGTTTCAATTTGGCATAAACTTTATACCAAACGAAATAT TTATAAATCATAAGGGGCAAATATTTACAAAAATTAACAATAAAAATCAACAAATAGCATCAATAAATCCAAAAAATGGT TTGCTTATCTTAACCTTAAGTGGGGGAGAGTTGTTGTGGAACAGTGGGGGAAAAGACATCAACTATATTGAAGTAAATTA TGAAATTAAAAAAGGTTCTCTCTTTCCTCCCGGATTTGTTGATTGCAATGAAAATATTTCCTATAATGATGAAGTCGTCT TAATTAAAGATGATACATTTTTAGGGATTGGAAGAGCTTTGATGAGTGGTTTTGAAATGAAAAAGGCAAAGCATGGAGCT TTAGTAAATATAAGAAATGTTAAAAGCTGA
Upstream 100 bases:
>100_bases ACCTTAATTTTTGGTTTCATAATCTCCCAACATTAATTTTATTAATGGTGATTATTAATATTCTTTTGAGTTTTAAAATT AAAGTTGTTGATGTGATAAA
Downstream 100 bases:
>100_bases CCTCCTCTCCGAGCTAAAGCTCGGAGGTTCCCACGGGGAACACCCTTCTCCCTACCGTCGCCGGTAGGTCACAGGGCAGG TTCAGCTCATCGGGCTGGGT
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA LVNIRNVKS
Sequences:
>Translated_569_residues MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA LVNIRNVKS >Mature_569_residues MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA LVNIRNVKS
Specific function: Unknown
COG id: COG1549
COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1022_METJA (Q58428)
Other databases:
- EMBL: L77117 - PIR: E64427 - RefSeq: NP_248016.1 - ProteinModelPortal: Q58428 - GeneID: 1451919 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1022 - NMPDR: fig|243232.1.peg.1053 - TIGR: MJ1022 - HOGENOM: HBG541053 - OMA: GVVPREW - ProtClustDB: CLSK876428 - BioCyc: MJAN243232:MJ_1022-MONOMER - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR002616 - Gene3D: G3DSA:3.20.20.105 - SMART: SM00359
Pfam domain/function: PF01472 PUA; PF01702 TGT; SSF88697 PUA-like; SSF51713 tRNA_ribo_trans
EC number: NA
Molecular weight: Translated: 65583; Mature: 65583
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSY CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH VKADGIKMPFDTFRELTSIFKKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIA HHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE DGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLLAYIGVDYFDDSLAKLYASMG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC YKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN CEEECCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECC YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSI CEECCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC SQSHQKFIKAIKSAKVVVEEVILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH KNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGNPTSEEALKNLTDTLKKYKEL HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH TKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG HHCCCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCEEEEEECCCCCEEEEECCCCC LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTF EEEEEECCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH LGIGRALMSGFEMKKAKHGALVNIRNVKS HHHHHHHHCCHHHHHCCCCCEEEECCCCC >Mature Secondary Structure MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSY CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH VKADGIKMPFDTFRELTSIFKKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIA HHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE DGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLLAYIGVDYFDDSLAKLYASMG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC YKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN CEEECCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECC YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSI CEECCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC SQSHQKFIKAIKSAKVVVEEVILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH KNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGNPTSEEALKNLTDTLKKYKEL HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH TKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG HHCCCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCEEEEEECCCCCEEEEECCCCC LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTF EEEEEECCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH LGIGRALMSGFEMKKAKHGALVNIRNVKS HHHHHHHHCCHHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087