Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669211

Identifier: 15669211

GI number: 15669211

Start: 951964

End: 953673

Strand: Reverse

Name: 15669211

Synonym: MJ1022

Alternate gene names: NA

Gene position: 953673-951964 (Counterclockwise)

Preceding gene: 15669214

Following gene: 15669210

Centisome position: 57.28

GC content: 30.58

Gene sequence:

>1710_bases
ATGCTCGAACCAATTGCCTATGATATTGGAAGACTGTGCAAAGAGGAAGATAAAGAACTAACCCCTAAGCTAATTGACAT
TGATGTCATAGGACTTTCGCAGGAAAAAATTTTTTATGGTATAATGACACCTTTTAGGTGTCCAAATTCCAAATCCATAT
ATGAACTGCGAAAGTCCTATGTTAAAGCTGATGGCATAAAGATGCCTTTTGATACATTTAGAGAACTAACCTCAATATTT
AAAAAATCTTTTATTGGAACTGTTAAATATAAGGGTAATGTATTTAAATATCAAATACTAAACTTTGGTAAGCACGTTGA
TTTAATTGAATTGGAAGATGCTGATTTATATATCATAGCAGATGGTAGAAGGTTGATAGAAAGAAAAGAACTTCAAATAA
TACCAAAAATTAGAGAAAAAATATCTCCAAACTCAGCTATTTACTCCCCAGCTGTATTTCCTTGGGAAATTCCACTATTG
GCTTATATAGGCGTTGATTACTTTGATGACTCATTAGCTAAGTTATATGCATCAATGGGCTACAAATTTACAAAAAATAG
GGCTGTAAAGGTAGATAGCTTTAGTTTTGAGGAATTATATAATAACAATAAAAAAGTTTATGAGGAAATCTTAGAAGAAG
TTAGGATAGCTATAAAAAATGGATTTCTAAGAAATGTTGTTGAAGAAACAGCTGTATCTCATCCATATTTGTGGGCAAAT
TATAGAAGATATGAGCCAGATTTAAGAAACATCCCGTTATCAAAAGAAAATAAGATTATTGTAACAACCAACATTAATAT
TCCAGAGGTTAAAAAATATTTGGAAAGATTAGATAACTATGAGCCGTATTCAAACATTATAGTTTTATTACCTTGCTCAT
CAAAAAAGCCCTACTCAATTTCCCAATCTCACCAAAAATTTATAAAGGCGATAAAATCTGCAAAAGTTGTTGTTGAGGAA
GTTATATTAACATCTCCCTACGGATTAGTGCCGAGAGCTTTGGAAAGGTTAGTCAATTATGACATTCCAGTAACTGGAGA
ATGGAGTTTTGAAGAGATAGAGCTTATAAACAACTGTTTAAAAAACTTCTTAAAGAAGGTTAAGGAGAAATTTGATGATT
ATATTGTTATAGCTCATCTTCCAGAACACTACCTTGAGATTTTGGAGTTGGATGATATTGTTATTACATCAAAAGGAAAT
CCAACATCAGAAGAAGCTTTAAAAAATTTAACTGACACACTAAAAAAGTATAAAGAACTAACAAAAAGTAAAGATATAAA
TAAAAAGGGACAAAGAATTCATAATATTCAGCAACTTGCAGAGTTTCAATTTGGCATAAACTTTATACCAAACGAAATAT
TTATAAATCATAAGGGGCAAATATTTACAAAAATTAACAATAAAAATCAACAAATAGCATCAATAAATCCAAAAAATGGT
TTGCTTATCTTAACCTTAAGTGGGGGAGAGTTGTTGTGGAACAGTGGGGGAAAAGACATCAACTATATTGAAGTAAATTA
TGAAATTAAAAAAGGTTCTCTCTTTCCTCCCGGATTTGTTGATTGCAATGAAAATATTTCCTATAATGATGAAGTCGTCT
TAATTAAAGATGATACATTTTTAGGGATTGGAAGAGCTTTGATGAGTGGTTTTGAAATGAAAAAGGCAAAGCATGGAGCT
TTAGTAAATATAAGAAATGTTAAAAGCTGA

Upstream 100 bases:

>100_bases
ACCTTAATTTTTGGTTTCATAATCTCCCAACATTAATTTTATTAATGGTGATTATTAATATTCTTTTGAGTTTTAAAATT
AAAGTTGTTGATGTGATAAA

Downstream 100 bases:

>100_bases
CCTCCTCTCCGAGCTAAAGCTCGGAGGTTCCCACGGGGAACACCCTTCTCCCTACCGTCGCCGGTAGGTCACAGGGCAGG
TTCAGCTCATCGGGCTGGGT

Product: queuine tRNA-ribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF
KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL
AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN
YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE
VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN
PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG
LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA
LVNIRNVKS

Sequences:

>Translated_569_residues
MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF
KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL
AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN
YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE
VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN
PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG
LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA
LVNIRNVKS
>Mature_569_residues
MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSYVKADGIKMPFDTFRELTSIF
KKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIADGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLL
AYIGVDYFDDSLAKLYASMGYKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN
YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSISQSHQKFIKAIKSAKVVVEE
VILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCLKNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGN
PTSEEALKNLTDTLKKYKELTKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG
LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTFLGIGRALMSGFEMKKAKHGA
LVNIRNVKS

Specific function: Unknown

COG id: COG1549

COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1022_METJA (Q58428)

Other databases:

- EMBL:   L77117
- PIR:   E64427
- RefSeq:   NP_248016.1
- ProteinModelPortal:   Q58428
- GeneID:   1451919
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1022
- NMPDR:   fig|243232.1.peg.1053
- TIGR:   MJ1022
- HOGENOM:   HBG541053
- OMA:   GVVPREW
- ProtClustDB:   CLSK876428
- BioCyc:   MJAN243232:MJ_1022-MONOMER
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616
- Gene3D:   G3DSA:3.20.20.105
- SMART:   SM00359

Pfam domain/function: PF01472 PUA; PF01702 TGT; SSF88697 PUA-like; SSF51713 tRNA_ribo_trans

EC number: NA

Molecular weight: Translated: 65583; Mature: 65583

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSY
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
VKADGIKMPFDTFRELTSIFKKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIA
HHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE
DGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLLAYIGVDYFDDSLAKLYASMG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
YKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN
CEEECCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECC
YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSI
CEECCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
SQSHQKFIKAIKSAKVVVEEVILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
KNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGNPTSEEALKNLTDTLKKYKEL
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
TKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG
HHCCCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCEEEEEECCCCCEEEEECCCCC
LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTF
EEEEEECCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH
LGIGRALMSGFEMKKAKHGALVNIRNVKS
HHHHHHHHCCHHHHHCCCCCEEEECCCCC
>Mature Secondary Structure
MLEPIAYDIGRLCKEEDKELTPKLIDIDVIGLSQEKIFYGIMTPFRCPNSKSIYELRKSY
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
VKADGIKMPFDTFRELTSIFKKSFIGTVKYKGNVFKYQILNFGKHVDLIELEDADLYIIA
HHCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE
DGRRLIERKELQIIPKIREKISPNSAIYSPAVFPWEIPLLAYIGVDYFDDSLAKLYASMG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
YKFTKNRAVKVDSFSFEELYNNNKKVYEEILEEVRIAIKNGFLRNVVEETAVSHPYLWAN
CEEECCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECC
YRRYEPDLRNIPLSKENKIIVTTNINIPEVKKYLERLDNYEPYSNIIVLLPCSSKKPYSI
CEECCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
SQSHQKFIKAIKSAKVVVEEVILTSPYGLVPRALERLVNYDIPVTGEWSFEEIELINNCL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
KNFLKKVKEKFDDYIVIAHLPEHYLEILELDDIVITSKGNPTSEEALKNLTDTLKKYKEL
HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
TKSKDINKKGQRIHNIQQLAEFQFGINFIPNEIFINHKGQIFTKINNKNQQIASINPKNG
HHCCCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCEEEEEECCCCCEEEEECCCCC
LLILTLSGGELLWNSGGKDINYIEVNYEIKKGSLFPPGFVDCNENISYNDEVVLIKDDTF
EEEEEECCCEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCH
LGIGRALMSGFEMKKAKHGALVNIRNVKS
HHHHHHHHCCHHHHHCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087