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The map label for this gene is rpl15e

Identifier: 15669173

GI number: 15669173

Start: 915067

End: 915651

Strand: Reverse

Name: rpl15e

Synonym: MJ0983

Alternate gene names: 15669173

Gene position: 915651-915067 (Counterclockwise)

Preceding gene: 15669175

Following gene: 15669172

Centisome position: 55.0

GC content: 39.15

Gene sequence:

>585_bases
ATGGGAATCTACAAGTATATAAGAGAAGCATGGAAAAGACCAAAAGAGAGTTACGTTAGACAGCTATTATGGGAAAGATT
ACAGCAGTGGAGAAGAGAACCAGCAGTTGTAAGAATTGAGAGACCAACAAGGTTAGACAGAGCAAGAGCATTAGGATACA
AACCAAAACAAGGAATAATTGTTGTCAGAGTAAGAGTTAGAAGAGGAGGTTTAAGAAAACCAAGACCAAAGAACTCAAAG
AAGCCAGCTACACTTGGGGTTAACAAGATAACAATGGGTAAATCAATTCAAAGAATTGCTGAAGAGAGAGCAGCAAGAAA
ATATCCAAACATGGAAGTTTTAAACAGCTACTGGGTTGGAGAAGATGGAAAACACAAGTGGTATGAGGTTATATTAGTTG
ACCCATACCACCCAGCTATTAAAGCTGATCCTCAACTCAACTGGTTATGCACTGGAAAACACAGAGGAAGAGCATTCAGA
GGTTTAACATCAGCTGGTAAGAAGGGTAGAGGTTTAAGAAACAAAGGAATAGGAGCTGAGAAGGTTAGACCAAGTATAAG
AGCTCATGGAAGAAGAGGTAAGTAA

Upstream 100 bases:

>100_bases
TTAAATTAATATAATAGTTGTCTATAGTTATTTACTCTAAAGCTTTGATATTATAAAAGGGGATGTGGCGGCAATGCTGA
ACCCATAGAAGAGGGATAAA

Downstream 100 bases:

>100_bases
ATTGATAAAATTTATATACTCCCTTATACTTATTTCTATCCTTTAGGGGAAACAACCACTAATTTTTAAATCCCCGACAA
TATTCAAAAAGATAACAACT

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK
KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFR
GLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK

Sequences:

>Translated_194_residues
MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSK
KPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFR
GLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK
>Mature_193_residues
GIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSKK
PATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRG
LTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=174, Percent_Identity=50.5747126436782, Blast_Score=174, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17541432, Length=174, Percent_Identity=48.8505747126437, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6323057, Length=178, Percent_Identity=47.1910112359551, Blast_Score=162, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6323769, Length=178, Percent_Identity=47.1910112359551, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_METJA (P54060)

Other databases:

- EMBL:   L77117
- PIR:   G64422
- RefSeq:   NP_247978.1
- ProteinModelPortal:   P54060
- SMR:   P54060
- GeneID:   1451881
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0983
- NMPDR:   fig|243232.1.peg.1015
- TIGR:   MJ0983
- HOGENOM:   HBG577798
- OMA:   KWYEVIL
- ProtClustDB:   PRK04243
- BioCyc:   MJAN243232:MJ_0983-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 22579; Mature: 22448

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGII
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCEE
VVRVRVRRGGLRKPRPKNSKKPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVG
EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
EDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAE
CCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHH
KVRPSIRAHGRRGK
HHCCHHHCCCCCCC
>Mature Secondary Structure 
GIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGII
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCEE
VVRVRVRRGGLRKPRPKNSKKPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVG
EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
EDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAE
CCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHH
KVRPSIRAHGRRGK
HHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087