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The map label for this gene is rps2P

Identifier: 15669172

GI number: 15669172

Start: 914279

End: 914947

Strand: Reverse

Name: rps2P

Synonym: MJ0982

Alternate gene names: 15669172

Gene position: 914947-914279 (Counterclockwise)

Preceding gene: 15669173

Following gene: 15669171

Centisome position: 54.95

GC content: 35.28

Gene sequence:

>669_bases
ATGAGTGAGAAGGAATTGTTAGTACCATTAGACACATACTTGGCTTCAGGTATCCATATAGGGACTCAGCAAAAGACAAA
AGACATGGAGAAATTTATTTACAGAGTAAGAAGTGATGGATTGTATGTTTTAGATGTTAGAAAGACTGATGAGAGATTAA
GAATAGCTGCTAAATTCTTAGCAAGATACGAACCAGAGGATATATTAGCTGTTTCAAGAAGAATCTACACAATGGGACCG
TTAGAAGAGTTTGGAAAATACACTGGAATTAGAACAGTTGCAGGAAGATTTGTCCCTGGAACATTAACAAACCCTGCATA
CAAAGGGTTTATGGAGCCAGAAGTTGTATTTATCAGTGACCCAAGAGTTGATAGACAGGCATTGAAAGAGGCAACAGAAA
TTGGAGTTCCAATAGTTGGTTTATGTGATACAGAGCACTTAACATCGTTCATCGACTTAGTTATACCAACAAACAACAAG
GGTAAGAAAGCAGTTGCTTTAATCTACTACTTATTAACAAGAGAGTATCTCAAAAACAGAGGAGTTATAACTGACGATAC
AAAATTACCATTCACTTATGAAGAGTTTTTAGAAAAGGCAGCAAATCCAAAATACAGAATTATAATTCAACCAAAAGACA
AGAGAAGAAGAAGGAGAAGAAGAAAATAA

Upstream 100 bases:

>100_bases
TCCCTTATACTTATTTCTATCCTTTAGGGGAAACAACCACTAATTTTTAAATCCCCGACAATATTCAAAAAGATAACAAC
TATTTTTAAAGGTGGAAAAT

Downstream 100 bases:

>100_bases
ATAAATAAACAAAATACTTAGAGGTTTTTGGAGATGACTGAAAAAATATATCTTAAGTGTGAGAATTGTGGGTTTGAAGA
GCAGGAAGTATTAAAGAAAA

Product: 30S ribosomal protein S2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYEPEDILAVSRRIYTMGP
LEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNK
GKKAVALIYYLLTREYLKNRGVITDDTKLPFTYEEFLEKAANPKYRIIIQPKDKRRRRRRRK

Sequences:

>Translated_222_residues
MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYEPEDILAVSRRIYTMGP
LEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNK
GKKAVALIYYLLTREYLKNRGVITDDTKLPFTYEEFLEKAANPKYRIIIQPKDKRRRRRRRK
>Mature_221_residues
SEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYEPEDILAVSRRIYTMGPL
EEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKG
KKAVALIYYLLTREYLKNRGVITDDTKLPFTYEEFLEKAANPKYRIIIQPKDKRRRRRRRK

Specific function: Unknown

COG id: COG0052

COG function: function code J; Ribosomal protein S2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S2P family

Homologues:

Organism=Homo sapiens, GI9845502, Length=185, Percent_Identity=37.2972972972973, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI59859885, Length=185, Percent_Identity=37.2972972972973, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17554768, Length=185, Percent_Identity=38.9189189189189, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323077, Length=176, Percent_Identity=40.3409090909091, Blast_Score=159, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321653, Length=176, Percent_Identity=39.7727272727273, Blast_Score=157, Evalue=1e-39,
Organism=Drosophila melanogaster, GI45551198, Length=185, Percent_Identity=34.0540540540541, Blast_Score=139, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24639112, Length=185, Percent_Identity=34.0540540540541, Blast_Score=138, Evalue=3e-33,
Organism=Drosophila melanogaster, GI17136518, Length=185, Percent_Identity=34.0540540540541, Blast_Score=138, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS2_METJA (P54109)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247977.1
- ProteinModelPortal:   P54109
- SMR:   P54109
- GeneID:   1451880
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0982
- NMPDR:   fig|243232.1.peg.1014
- TIGR:   MJ0982
- HOGENOM:   HBG736296
- OMA:   NTVAGRF
- ProtClustDB:   PRK04020
- BioCyc:   MJAN243232:MJ_0982-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00291_A
- InterPro:   IPR001865
- InterPro:   IPR018130
- InterPro:   IPR005707
- PANTHER:   PTHR11489
- PRINTS:   PR00395
- TIGRFAMs:   TIGR01012

Pfam domain/function: PF00318 Ribosomal_S2; SSF52313 Ribosomal_S2

EC number: NA

Molecular weight: Translated: 25708; Mature: 25577

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00962 RIBOSOMAL_S2_1; PS00963 RIBOSOMAL_S2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFL
CCCCCEEEEHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
ARYEPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISD
HHCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEC
PRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNR
CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCC
GVITDDTKLPFTYEEFLEKAANPKYRIIIQPKDKRRRRRRRK
CCEECCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCC
>Mature Secondary Structure 
SEKELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFL
CCCCEEEEHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
ARYEPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISD
HHCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEC
PRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNR
CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCC
GVITDDTKLPFTYEEFLEKAANPKYRIIIQPKDKRRRRRRRK
CCEECCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087