| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669146
Identifier: 15669146
GI number: 15669146
Start: 887436
End: 888218
Strand: Direct
Name: 15669146
Synonym: MJ0956
Alternate gene names: NA
Gene position: 887436-888218 (Clockwise)
Preceding gene: 15669145
Following gene: 15669147
Centisome position: 53.3
GC content: 30.01
Gene sequence:
>783_bases ATGCATGAGGATGTTTGGAGTTTAATTAAAGAAACAAATCATAAAACTATTCTATACTCTCATGGAATGAAAAACAGGGT TTTGTTAGGATATTTATTAAAGCTTAGGGGGAAATATAACTTTGACTTTGAGGCAGTAACGTTTATTTCAGATAGAAGTC CAAAATGGGTAAGAGAAGAGATAAAGTGGATTATGAAAGCAAATGATGTTAAACATAGATTTATTGAGTGTGGAAAATGC AAGATAAGCTTAGAAAATAATGGACATGATTATCACGGAAGTTGTGTAGTTTGGGAGGGTATTAAAAATTTTGAGGGAGG AGTTGTAGCATCATCAATAGGAGAGCATATTAAAGATAAAGAACGATTTTTAACGTGGTGTAACGATTATAACTTATTTC CTCCTTTTATTCACTTAAATGTCTCAAGAGAAAGGCTTGTTAAAGAATTTGAAAGCTTAGATAAAAATCTAATTTCAAGT TGCTATCATGCATGTGTATTCTGCCCTATATTGTATAAACTTGGAAAAAGTTTGATAAAATCAGAGATTTTCTATAAGAA AAAGATTTTAACCGATAATGAAAGGAAAGAACATGCTTTAAATGAATTTTATGATGCTATGAAGGAGCAAGATATTGGTA GGATGATTAATTCGGTTAAAATTTACTATAATAAGTATATAAGAGAGTTAGATGAGCCGTATGCCGATTATATAAAGAGT AGAGATGTTGAGATGTTTGATAAATTGGTTAATAAGTGTAAAGAGTATTTAGGGGTGAAATAA
Upstream 100 bases:
>100_bases CATTTAAATTAAAGAATAATAAAAACTTTTATATGTAAGTCTTTTGATAATTAAAATTTACTTAAAAAATAATATAGATT TTTTTATATAGTGGGTTTTT
Downstream 100 bases:
>100_bases TGGGGGACGATATTTATATACCTCCAAAACCCAAACCCAAGCCAAAACCAAAACCTGAGTATAAATACGCTTTATGGTAT TTTAAATACACCAATACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MHEDVWSLIKETNHKTILYSHGMKNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREEIKWIMKANDVKHRFIECGKC KISLENNGHDYHGSCVVWEGIKNFEGGVVASSIGEHIKDKERFLTWCNDYNLFPPFIHLNVSRERLVKEFESLDKNLISS CYHACVFCPILYKLGKSLIKSEIFYKKKILTDNERKEHALNEFYDAMKEQDIGRMINSVKIYYNKYIRELDEPYADYIKS RDVEMFDKLVNKCKEYLGVK
Sequences:
>Translated_260_residues MHEDVWSLIKETNHKTILYSHGMKNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREEIKWIMKANDVKHRFIECGKC KISLENNGHDYHGSCVVWEGIKNFEGGVVASSIGEHIKDKERFLTWCNDYNLFPPFIHLNVSRERLVKEFESLDKNLISS CYHACVFCPILYKLGKSLIKSEIFYKKKILTDNERKEHALNEFYDAMKEQDIGRMINSVKIYYNKYIRELDEPYADYIKS RDVEMFDKLVNKCKEYLGVK >Mature_260_residues MHEDVWSLIKETNHKTILYSHGMKNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREEIKWIMKANDVKHRFIECGKC KISLENNGHDYHGSCVVWEGIKNFEGGVVASSIGEHIKDKERFLTWCNDYNLFPPFIHLNVSRERLVKEFESLDKNLISS CYHACVFCPILYKLGKSLIKSEIFYKKKILTDNERKEHALNEFYDAMKEQDIGRMINSVKIYYNKYIRELDEPYADYIKS RDVEMFDKLVNKCKEYLGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y956_METJA (Q58366)
Other databases:
- EMBL: L77117 - PIR: D64419 - RefSeq: NP_247951.1 - GeneID: 1451854 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0956 - NMPDR: fig|243232.1.peg.988 - TIGR: MJ0956 - ProtClustDB: CLSK2749939 - BioCyc: MJAN243232:MJ_0956-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30867; Mature: 30867
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEDVWSLIKETNHKTILYSHGMKNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREE CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCHHHHHH IKWIMKANDVKHRFIECGKCKISLENNGHDYHGSCVVWEGIKNFEGGVVASSIGEHIKDK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH ERFLTWCNDYNLFPPFIHLNVSRERLVKEFESLDKNLISSCYHACVFCPILYKLGKSLIK HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEIFYKKKILTDNERKEHALNEFYDAMKEQDIGRMINSVKIYYNKYIRELDEPYADYIKS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC RDVEMFDKLVNKCKEYLGVK CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHEDVWSLIKETNHKTILYSHGMKNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREE CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCHHHHHH IKWIMKANDVKHRFIECGKCKISLENNGHDYHGSCVVWEGIKNFEGGVVASSIGEHIKDK HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH ERFLTWCNDYNLFPPFIHLNVSRERLVKEFESLDKNLISSCYHACVFCPILYKLGKSLIK HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEIFYKKKILTDNERKEHALNEFYDAMKEQDIGRMINSVKIYYNKYIRELDEPYADYIKS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC RDVEMFDKLVNKCKEYLGVK CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087