| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669147
Identifier: 15669147
GI number: 15669147
Start: 888218
End: 889270
Strand: Direct
Name: 15669147
Synonym: MJ0957
Alternate gene names: NA
Gene position: 888218-889270 (Clockwise)
Preceding gene: 15669146
Following gene: 15669148
Centisome position: 53.35
GC content: 29.82
Gene sequence:
>1053_bases ATGGGGGACGATATTTATATACCTCCAAAACCCAAACCCAAGCCAAAACCAAAACCTGAGTATAAATACGCTTTATGGTA TTTTAAATACACCAATACTTATGAGAAAAGATTTAATGGAACAGTAGGTGATTTATTAAATAGAGGGTTTAACTACGCAA TTGCTTTGGAAAAGGATGAAGGTAGTGGAACTCCGGAAAGTGGAAATTTAAGAGAAGATGGTGAAAAAGATGGAAAAGAA TTTGGAGAGTTTATAAATTCAGAACTCTCTGGAATTAAGTATATTGCTCAAATTCCTTATTATAAACGTGGAATGTTAGA AAAATTAAAAAATGCTTCCAAAGACAAAAAACAGATGGAATATTATATAAACCATATTTATCTGGTAAAAAGAACATTAG AATACTGGAAGGGTTGGATTGATGGAGTTATTGAAAGTTGTGATAGCAATTTAGTAGGATTTTATTGGAATTTTGAATCT CCTGGGCAAGTAAGTTGGGGATTTATTACTGATTGGGAAATAGCACAATTATCAACATATATCAAACAAAAATCTAATGA ATTGAACAGAAAATTAGAGTTTATATGGATTCCCTATATTAACGATATAGAGAATCCAGATAATAATGATATAAAACGAT TATCAAAGTATTTTGACTATGTATTTGTTCAACCACACTATTATATTGCATGGAAATACTGGTGTCTCTGGAACTATGAA AAAAATGTGAGTGAAGATATAAGAGAATATTGGAAATACCAAATTAACAGATATAATGGATATTTAACTCAGGGAATAAC AAAACTTATAGAGGTTCTTAATTGGATAAAAGAAATTCCTAATGGATATATAGAAATGGAAGTAGATAATAAAATTGATG AATATAAATATCATGATTTGATAAACAAAGCATGTGATTATATTAAAGCCCGAGAGTTCTTAACTGGTAGAGATATTTGG CAAATAAGAGCATACTACTTTGACACAAATATTGAGAATGTAGATAAGGTGAGAAATGGAGCTTACGGTATAAAAGGATG TAAAAACTGGTGA
Upstream 100 bases:
>100_bases GAGAGTTAGATGAGCCGTATGCCGATTATATAAAGAGTAGAGATGTTGAGATGTTTGATAAATTGGTTAATAAGTGTAAA GAGTATTTAGGGGTGAAATA
Downstream 100 bases:
>100_bases GATTATGAAAAAATTCATTTTATTTTTAATAATTTTATTATTTTCTATTTATTTTTTAAATGTCTCTTCAGCAGAAGTTT GTCCATTTAAGGATGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MGDDIYIPPKPKPKPKPKPEYKYALWYFKYTNTYEKRFNGTVGDLLNRGFNYAIALEKDEGSGTPESGNLREDGEKDGKE FGEFINSELSGIKYIAQIPYYKRGMLEKLKNASKDKKQMEYYINHIYLVKRTLEYWKGWIDGVIESCDSNLVGFYWNFES PGQVSWGFITDWEIAQLSTYIKQKSNELNRKLEFIWIPYINDIENPDNNDIKRLSKYFDYVFVQPHYYIAWKYWCLWNYE KNVSEDIREYWKYQINRYNGYLTQGITKLIEVLNWIKEIPNGYIEMEVDNKIDEYKYHDLINKACDYIKAREFLTGRDIW QIRAYYFDTNIENVDKVRNGAYGIKGCKNW
Sequences:
>Translated_350_residues MGDDIYIPPKPKPKPKPKPEYKYALWYFKYTNTYEKRFNGTVGDLLNRGFNYAIALEKDEGSGTPESGNLREDGEKDGKE FGEFINSELSGIKYIAQIPYYKRGMLEKLKNASKDKKQMEYYINHIYLVKRTLEYWKGWIDGVIESCDSNLVGFYWNFES PGQVSWGFITDWEIAQLSTYIKQKSNELNRKLEFIWIPYINDIENPDNNDIKRLSKYFDYVFVQPHYYIAWKYWCLWNYE KNVSEDIREYWKYQINRYNGYLTQGITKLIEVLNWIKEIPNGYIEMEVDNKIDEYKYHDLINKACDYIKAREFLTGRDIW QIRAYYFDTNIENVDKVRNGAYGIKGCKNW >Mature_349_residues GDDIYIPPKPKPKPKPKPEYKYALWYFKYTNTYEKRFNGTVGDLLNRGFNYAIALEKDEGSGTPESGNLREDGEKDGKEF GEFINSELSGIKYIAQIPYYKRGMLEKLKNASKDKKQMEYYINHIYLVKRTLEYWKGWIDGVIESCDSNLVGFYWNFESP GQVSWGFITDWEIAQLSTYIKQKSNELNRKLEFIWIPYINDIENPDNNDIKRLSKYFDYVFVQPHYYIAWKYWCLWNYEK NVSEDIREYWKYQINRYNGYLTQGITKLIEVLNWIKEIPNGYIEMEVDNKIDEYKYHDLINKACDYIKAREFLTGRDIWQ IRAYYFDTNIENVDKVRNGAYGIKGCKNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y957_METJA (Q58367)
Other databases:
- EMBL: L77117 - PIR: E64419 - RefSeq: NP_247952.1 - GeneID: 1451855 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0957 - NMPDR: fig|243232.1.peg.989 - TIGR: MJ0957 - ProtClustDB: CLSK254477 - BioCyc: MJAN243232:MJ_0957-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42001; Mature: 41870
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDDIYIPPKPKPKPKPKPEYKYALWYFKYTNTYEKRFNGTVGDLLNRGFNYAIALEKDE CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHCCCHHHHHHCCCCEEEEEEECC GSGTPESGNLREDGEKDGKEFGEFINSELSGIKYIAQIPYYKRGMLEKLKNASKDKKQME CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH YYINHIYLVKRTLEYWKGWIDGVIESCDSNLVGFYWNFESPGQVSWGFITDWEIAQLSTY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCEECCCHHHHHHHH IKQKSNELNRKLEFIWIPYINDIENPDNNDIKRLSKYFDYVFVQPHYYIAWKYWCLWNYE HHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEECCCEEEEEEEEEEECCC KNVSEDIREYWKYQINRYNGYLTQGITKLIEVLNWIKEIPNGYIEMEVDNKIDEYKYHDL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH INKACDYIKAREFLTGRDIWQIRAYYFDTNIENVDKVRNGAYGIKGCKNW HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GDDIYIPPKPKPKPKPKPEYKYALWYFKYTNTYEKRFNGTVGDLLNRGFNYAIALEKDE CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHCCCHHHHHHCCCCEEEEEEECC GSGTPESGNLREDGEKDGKEFGEFINSELSGIKYIAQIPYYKRGMLEKLKNASKDKKQME CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH YYINHIYLVKRTLEYWKGWIDGVIESCDSNLVGFYWNFESPGQVSWGFITDWEIAQLSTY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCEECCCHHHHHHHH IKQKSNELNRKLEFIWIPYINDIENPDNNDIKRLSKYFDYVFVQPHYYIAWKYWCLWNYE HHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEECCCEEEEEEEEEEECCC KNVSEDIREYWKYQINRYNGYLTQGITKLIEVLNWIKEIPNGYIEMEVDNKIDEYKYHDL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH INKACDYIKAREFLTGRDIWQIRAYYFDTNIENVDKVRNGAYGIKGCKNW HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087