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The map label for this gene is yoaA [C]

Identifier: 15669132

GI number: 15669132

Start: 871492

End: 873447

Strand: Direct

Name: yoaA [C]

Synonym: MJ0942

Alternate gene names: 15669132

Gene position: 871492-873447 (Clockwise)

Preceding gene: 15669131

Following gene: 15669134

Centisome position: 52.34

GC content: 29.7

Gene sequence:

>1956_bases
ATGGAATTTAAAGGGTATATTAAAGAGAAGTTTCCATATCCTAAAGTTAGGGAGCCACAGAAAAGGATGATGCTAAAAAT
TTACGAGTGTATAAAAAATAAGAGAAATTTGATAGTTGAAGCACCAACTGGTGTTGGAAAAACTTTAGGCTATCTAATTC
CTGCTTTATACTTTGCAGAGAGAAGAAAGAGAGTTTTAATATTAACAGAAACGATAGACCAGCAGGTTAGGATTTATGAG
GATTTAAGTTCTCTAAGGCATAATTTAAAGGTTGCATTCTTAATGGGAAAAAGTAACTTTATTTGCAAATCAAAAGGAGG
AAAGGCTAATAGACTATATTGCCAATTGAATAAAAAATGCTTATATAGACCAAATAAAAGACCAATTTGCTATTGTGGAA
CAAAAAAACAACCAGTGAATTTAGGGGATAAAGTTATTTACTACTGCCCATACTGCACCTGTGAATATCAAAAGGCAAAA
ATAGAGAGTATCTTAGCTGATATTGTGGTTATGAATAACAGTATGTTTTACTATGCTAAGGAAGATATTGAGGCAAAAAG
AGATATTGATATAATTATTTGTGATGAAGCCCATAAATTGGAAAGCAGTATAAGAAATACATCAACAATAATTATAAATC
CAGAATTACCAATTAATAGATTAAAATATATGGCTATACATTATGCTCCCAATATTTTAAAAAAGAGATTGGATATTGGA
GACGAAAATTTTTGGGAAATTATTGAAAAATATTTAACAAGTAGAGGCATCAATATAGATATCTGCAAAGAGACAATTAT
TTTTGATGGAGAAAATTTAAGCTCTTGGAAATATAAGACAGAACTTGCTGTATTAGGGGCTATTTTAGATGCATATTATC
AAATAAACAACATAAAGAATAAAATATTGAGATTTAATGAAAATGAGGAAATTGATAGAGAGGAACTTAGATTTGAAATT
GACAATAAAGCTTTAATAGCTATAGAGCTTGATTTTATCCATAAAAAGAAATTATCTGACCTATATCTTTTGGAATTTAT
AGAAAATATTAAAAATTTAAGATATATTAATGAAAATTATGTAGTTTATAGAAGTGGAAATTCTTTATTATGTGAGCCAG
TTTTTGTAAGCTCTCATCTAAAAGAACTTTATGGAAATGCTGTAGTTATCCACTGCTCAGCAACAATTGGAAATTTAAAG
ATGCATGCTTTAAAGACAGGTTTAGATAAAGCAGAATTTTTAATTTTAGAGAGTCCATTTCCAAAGAATAGGAAGAAAAT
TATAGCTTTAAAAGATGGCGTTGATATGAAATACGAAAGGAAAGATAGAGAGAAAGCAAATAAAAATTTATTAAAAATAT
TGGAAGCAATAAATGGAAACTCTTTAGTTTTATTTAAGAGCTTTGAGGATTTAGATAGTTTTTATAAATATCTAAAAAGG
GAGATTACAAAAACAAATATTAAAAATAAAAATATCCATGTGTATGAGCAAGGTATGGATGGAAAAGAAGCTAAAGAGCT
AAAAGAGAGATTTGAAAAGATTGGAGGAATTTTGTTAGCAACTGGGAGGTTTGCTGAAGGAGTAGATATTCCTGGTGAGG
CATTGGTTGGAGTTGTTATTGACTCCCTTCCATTCCCAGTTCCCACTCCTTTAATATTGAGAGAGCAGAAGATATTGGAA
GAGAGATTTAAAATTAGAGGAGTTAGGGATGCTCATTGGAGAGCTTTTTTAATGACATCATTTGATAGAATGGCAAGGAC
ATTGGTTCAGATGATTGGAAGATTAATAAGAACTGAGAATGATTATGGAGTTGTAGTTATACAGGATAAGAGGTTCGCAG
ATTGGGTAGGAAGAGTTATGAGAGAAAAAGGTTATCTAAAAGATAACTATGAGGTTATGAGTTTGGATATGGCTATAAAA
TATATTCCAAAGTTTATGAGTCAGTTTAAAAATTAA

Upstream 100 bases:

>100_bases
ATATTATAACAAGGCTGTAGAAAATATTCACAAAGACCATGGAGAATAATATTTCCTCTTTTTTATTATTTTTTCTATAA
TTTAAAGTAAAGGGATTTTT

Downstream 100 bases:

>100_bases
ATTTTTATTTTTAGTTTTATTAATTGATAAAACTAAATTAACAAATATTATTATCTAAAATAAAAAAATGGTAGGGCGGC
GGGGATTCAAACGAACCTTT

Product: ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MEFKGYIKEKFPYPKVREPQKRMMLKIYECIKNKRNLIVEAPTGVGKTLGYLIPALYFAERRKRVLILTETIDQQVRIYE
DLSSLRHNLKVAFLMGKSNFICKSKGGKANRLYCQLNKKCLYRPNKRPICYCGTKKQPVNLGDKVIYYCPYCTCEYQKAK
IESILADIVVMNNSMFYYAKEDIEAKRDIDIIICDEAHKLESSIRNTSTIIINPELPINRLKYMAIHYAPNILKKRLDIG
DENFWEIIEKYLTSRGINIDICKETIIFDGENLSSWKYKTELAVLGAILDAYYQINNIKNKILRFNENEEIDREELRFEI
DNKALIAIELDFIHKKKLSDLYLLEFIENIKNLRYINENYVVYRSGNSLLCEPVFVSSHLKELYGNAVVIHCSATIGNLK
MHALKTGLDKAEFLILESPFPKNRKKIIALKDGVDMKYERKDREKANKNLLKILEAINGNSLVLFKSFEDLDSFYKYLKR
EITKTNIKNKNIHVYEQGMDGKEAKELKERFEKIGGILLATGRFAEGVDIPGEALVGVVIDSLPFPVPTPLILREQKILE
ERFKIRGVRDAHWRAFLMTSFDRMARTLVQMIGRLIRTENDYGVVVIQDKRFADWVGRVMREKGYLKDNYEVMSLDMAIK
YIPKFMSQFKN

Sequences:

>Translated_651_residues
MEFKGYIKEKFPYPKVREPQKRMMLKIYECIKNKRNLIVEAPTGVGKTLGYLIPALYFAERRKRVLILTETIDQQVRIYE
DLSSLRHNLKVAFLMGKSNFICKSKGGKANRLYCQLNKKCLYRPNKRPICYCGTKKQPVNLGDKVIYYCPYCTCEYQKAK
IESILADIVVMNNSMFYYAKEDIEAKRDIDIIICDEAHKLESSIRNTSTIIINPELPINRLKYMAIHYAPNILKKRLDIG
DENFWEIIEKYLTSRGINIDICKETIIFDGENLSSWKYKTELAVLGAILDAYYQINNIKNKILRFNENEEIDREELRFEI
DNKALIAIELDFIHKKKLSDLYLLEFIENIKNLRYINENYVVYRSGNSLLCEPVFVSSHLKELYGNAVVIHCSATIGNLK
MHALKTGLDKAEFLILESPFPKNRKKIIALKDGVDMKYERKDREKANKNLLKILEAINGNSLVLFKSFEDLDSFYKYLKR
EITKTNIKNKNIHVYEQGMDGKEAKELKERFEKIGGILLATGRFAEGVDIPGEALVGVVIDSLPFPVPTPLILREQKILE
ERFKIRGVRDAHWRAFLMTSFDRMARTLVQMIGRLIRTENDYGVVVIQDKRFADWVGRVMREKGYLKDNYEVMSLDMAIK
YIPKFMSQFKN
>Mature_651_residues
MEFKGYIKEKFPYPKVREPQKRMMLKIYECIKNKRNLIVEAPTGVGKTLGYLIPALYFAERRKRVLILTETIDQQVRIYE
DLSSLRHNLKVAFLMGKSNFICKSKGGKANRLYCQLNKKCLYRPNKRPICYCGTKKQPVNLGDKVIYYCPYCTCEYQKAK
IESILADIVVMNNSMFYYAKEDIEAKRDIDIIICDEAHKLESSIRNTSTIIINPELPINRLKYMAIHYAPNILKKRLDIG
DENFWEIIEKYLTSRGINIDICKETIIFDGENLSSWKYKTELAVLGAILDAYYQINNIKNKILRFNENEEIDREELRFEI
DNKALIAIELDFIHKKKLSDLYLLEFIENIKNLRYINENYVVYRSGNSLLCEPVFVSSHLKELYGNAVVIHCSATIGNLK
MHALKTGLDKAEFLILESPFPKNRKKIIALKDGVDMKYERKDREKANKNLLKILEAINGNSLVLFKSFEDLDSFYKYLKR
EITKTNIKNKNIHVYEQGMDGKEAKELKERFEKIGGILLATGRFAEGVDIPGEALVGVVIDSLPFPVPTPLILREQKILE
ERFKIRGVRDAHWRAFLMTSFDRMARTLVQMIGRLIRTENDYGVVVIQDKRFADWVGRVMREKGYLKDNYEVMSLDMAIK
YIPKFMSQFKN

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Escherichia coli, GI1788110, Length=674, Percent_Identity=25.9643916913947, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y942_METJA (Q58352)

Other databases:

- EMBL:   L77117
- PIR:   F64417
- RefSeq:   NP_247937.1
- ProteinModelPortal:   Q58352
- GeneID:   1451838
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0942
- NMPDR:   fig|243232.1.peg.974
- TIGR:   MJ0942
- HOGENOM:   HBG541281
- OMA:   TETIDQQ
- ProtClustDB:   CLSK876399
- BioCyc:   MJAN243232:MJ_0942-MONOMER
- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- SMART:   SM00487
- SMART:   SM00491

Pfam domain/function: PF04851 ResIII

EC number: =3.6.4.12

Molecular weight: Translated: 75958; Mature: 75958

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00690 DEAH_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51193 HELICASE_ATP_BIND_2; PS51194 HELICASE_CTER; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKGYIKEKFPYPKVREPQKRMMLKIYECIKNKRNLIVEAPTGVGKTLGYLIPALYFAE
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH
RRKRVLILTETIDQQVRIYEDLSSLRHNLKVAFLMGKSNFICKSKGGKANRLYCQLNKKC
CCCEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEEECCHH
LYRPNKRPICYCGTKKQPVNLGDKVIYYCPYCTCEYQKAKIESILADIVVMNNSMFYYAK
CCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEEC
EDIEAKRDIDIIICDEAHKLESSIRNTSTIIINPELPINRLKYMAIHYAPNILKKRLDIG
CCCCCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCHHHHHEEHEEHHHHHHHHHHCCC
DENFWEIIEKYLTSRGINIDICKETIIFDGENLSSWKYKTELAVLGAILDAYYQINNIKN
CCHHHHHHHHHHHHCCCEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KILRFNENEEIDREELRFEIDNKALIAIELDFIHKKKLSDLYLLEFIENIKNLRYINENY
HHEECCCCCCCCHHHHEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCEEECCCE
VVYRSGNSLLCEPVFVSSHLKELYGNAVVIHCSATIGNLKMHALKTGLDKAEFLILESPF
EEEECCCCEEECHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCC
PKNRKKIIALKDGVDMKYERKDREKANKNLLKILEAINGNSLVLFKSFEDLDSFYKYLKR
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
EITKTNIKNKNIHVYEQGMDGKEAKELKERFEKIGGILLATGRFAEGVDIPGEALVGVVI
HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHH
DSLPFPVPTPLILREQKILEERFKIRGVRDAHWRAFLMTSFDRMARTLVQMIGRLIRTEN
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DYGVVVIQDKRFADWVGRVMREKGYLKDNYEVMSLDMAIKYIPKFMSQFKN
CCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFKGYIKEKFPYPKVREPQKRMMLKIYECIKNKRNLIVEAPTGVGKTLGYLIPALYFAE
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHH
RRKRVLILTETIDQQVRIYEDLSSLRHNLKVAFLMGKSNFICKSKGGKANRLYCQLNKKC
CCCEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCCEEEEEEECCHH
LYRPNKRPICYCGTKKQPVNLGDKVIYYCPYCTCEYQKAKIESILADIVVMNNSMFYYAK
CCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEECCCEEEEEC
EDIEAKRDIDIIICDEAHKLESSIRNTSTIIINPELPINRLKYMAIHYAPNILKKRLDIG
CCCCCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCHHHHHEEHEEHHHHHHHHHHCCC
DENFWEIIEKYLTSRGINIDICKETIIFDGENLSSWKYKTELAVLGAILDAYYQINNIKN
CCHHHHHHHHHHHHCCCEEEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KILRFNENEEIDREELRFEIDNKALIAIELDFIHKKKLSDLYLLEFIENIKNLRYINENY
HHEECCCCCCCCHHHHEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCEEECCCE
VVYRSGNSLLCEPVFVSSHLKELYGNAVVIHCSATIGNLKMHALKTGLDKAEFLILESPF
EEEECCCCEEECHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHHHCCCCCEEEEEEECCC
PKNRKKIIALKDGVDMKYERKDREKANKNLLKILEAINGNSLVLFKSFEDLDSFYKYLKR
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
EITKTNIKNKNIHVYEQGMDGKEAKELKERFEKIGGILLATGRFAEGVDIPGEALVGVVI
HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHH
DSLPFPVPTPLILREQKILEERFKIRGVRDAHWRAFLMTSFDRMARTLVQMIGRLIRTEN
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DYGVVVIQDKRFADWVGRVMREKGYLKDNYEVMSLDMAIKYIPKFMSQFKN
CCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087