Click here to switch to the map view.

The map label for this gene is 15669131

Identifier: 15669131

GI number: 15669131

Start: 870424

End: 871440

Strand: Direct

Name: 15669131

Synonym: MJ0941

Alternate gene names: NA

Gene position: 870424-871440 (Clockwise)

Preceding gene: 15669130

Following gene: 15669132

Centisome position: 52.28

GC content: 31.86

Gene sequence:

>1017_bases
TTGATAGATAAAATTATTATCCTTTATTTTTATGGTGATATGCGTATGAATAGAAAGAGAACTCCAAGAGTGGATACCTT
AGAAGCCGTGGCTAATGTTTTAAGAGCTTATAGAGAATTATTTGAGGGAAATTTAATAAAAGCACTTTATTATGTTGATA
AAGCGTTGGAATTGGAGCCTGATTTCTATTTGGCTTTGTTTTTGAAGGGATTAGCATTATCCGCTAAAGGAGAAATAAAA
GAAGCAATTACAACATTTGAAGAATTGCTAAGCTATGAATCAAAAAATCCAATTACATGGGTGTTTGTTGGGCAACTGTA
TGGAATGTCAGGAAATTGTGATGAAGCATTAAAGTGTTACAACAAAGCGTTGGGCATTGAAAATAGATTTTTATCAGCAT
TTTTACTCAAAACGATTTGTTTAGAATTCTTAGGAGAGTATGATGAACTATTAAAATGCTATAATGAGGTATTAACATAT
ACTCCAAACTTTGTCCCAATGTGGGTTAAAAAGGCTGAAATCCTAAGAAAATTGGGGAGATATGAAGATGCATTACTATG
TTTAAATAGAGCCTTAGAGTTAAAGCCACATGATAAAAATGCCTTATATTTAAAAGGTGTTTTGTTAAAGAGAATGGGTA
AATTTAGGGAGGCACTTGAATGTTTCAAAAAATTGATAGATGAACTAAATGTAAAATGGATAGATGCCATAAGACATGCT
GTTTCTTTGATGTTAGCTCTTGACGATTTAAAAGATGCTGAAAGATACATAAATATAGGATTGGAGATAAGAAAAGATGA
CGTGGCTTTATGGTATTTTAAAGGGGAATTATATGAGAGATTGGGAAAGCTGGATGAAGCATTAAAATGCTATGAAAAAG
TTATTGAACTACAACCACATTATATAAAGGCACTTTTGAGTAAAGCAAGAATCTATGAGAGGCAGGGAAATATCGAAGCA
GCAATTGAATATTATAACAAGGCTGTAGAAAATATTCACAAAGACCATGGAGAATAA

Upstream 100 bases:

>100_bases
CAGCTGATGCCTCATCACACAAAAGCTTTACTTGCTAAGGCAAGGGTGTTAGAAAAACTTGGAAGAATAGAGGAATCTAT
AGAGTGCTACAATAAAGCAC

Downstream 100 bases:

>100_bases
TATTTCCTCTTTTTTATTATTTTTTCTATAATTTAAAGTAAAGGGATTTTTATGGAATTTAAAGGGTATATTAAAGAGAA
GTTTCCATATCCTAAAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIDKIIILYFYGDMRMNRKRTPRVDTLEAVANVLRAYRELFEGNLIKALYYVDKALELEPDFYLALFLKGLALSAKGEIK
EAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCYNKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTY
TPNFVPMWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA
VSLMLALDDLKDAERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYERQGNIEA
AIEYYNKAVENIHKDHGE

Sequences:

>Translated_338_residues
MIDKIIILYFYGDMRMNRKRTPRVDTLEAVANVLRAYRELFEGNLIKALYYVDKALELEPDFYLALFLKGLALSAKGEIK
EAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCYNKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTY
TPNFVPMWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA
VSLMLALDDLKDAERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYERQGNIEA
AIEYYNKAVENIHKDHGE
>Mature_338_residues
MIDKIIILYFYGDMRMNRKRTPRVDTLEAVANVLRAYRELFEGNLIKALYYVDKALELEPDFYLALFLKGLALSAKGEIK
EAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCYNKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTY
TPNFVPMWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA
VSLMLALDDLKDAERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYERQGNIEA
AIEYYNKAVENIHKDHGE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats

Homologues:

Organism=Homo sapiens, GI32307150, Length=305, Percent_Identity=23.6065573770492, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI32307148, Length=305, Percent_Identity=23.6065573770492, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI212549736, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI212549738, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=308, Percent_Identity=23.3766233766234, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=308, Percent_Identity=23.3766233766234, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24647123, Length=202, Percent_Identity=31.1881188118812, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17647755, Length=296, Percent_Identity=25.3378378378378, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585827, Length=296, Percent_Identity=25.3378378378378, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585829, Length=296, Percent_Identity=25.3378378378378, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y941_METJA (Q57711)

Other databases:

- EMBL:   L77117
- PIR:   E64417
- RefSeq:   NP_247936.1
- ProteinModelPortal:   Q57711
- SMR:   Q57711
- GeneID:   1451837
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0941
- NMPDR:   fig|243232.1.peg.973
- TIGR:   MJ0941
- HOGENOM:   HBG539154
- OMA:   EALKCYN
- ProtClustDB:   CLSK214561
- BioCyc:   MJAN243232:MJ_0941-MONOMER
- GO:   GO:0005488
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10
- SMART:   SM00028

Pfam domain/function: PF00515 TPR_1

EC number: NA

Molecular weight: Translated: 39451; Mature: 39451

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKIIILYFYGDMRMNRKRTPRVDTLEAVANVLRAYRELFEGNLIKALYYVDKALELEP
CCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DFYLALFLKGLALSAKGEIKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHH
NKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLGR
HHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
YEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VSLMLALDDLKDAERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPH
HHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHH
YIKALLSKARIYERQGNIEAAIEYYNKAVENIHKDHGE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDKIIILYFYGDMRMNRKRTPRVDTLEAVANVLRAYRELFEGNLIKALYYVDKALELEP
CCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DFYLALFLKGLALSAKGEIKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCHHHHHHHH
NKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLGR
HHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
YEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VSLMLALDDLKDAERYINIGLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPH
HHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHH
YIKALLSKARIYERQGNIEAAIEYYNKAVENIHKDHGE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087