Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669134

Identifier: 15669134

GI number: 15669134

Start: 875299

End: 875661

Strand: Direct

Name: 15669134

Synonym: MJ0944

Alternate gene names: NA

Gene position: 875299-875661 (Clockwise)

Preceding gene: 15669132

Following gene: 15669143

Centisome position: 52.57

GC content: 23.69

Gene sequence:

>363_bases
ATGCTTATTGGGATACTAAGCAAAAAATATGTTAAAGAAATTTTGGAACTACTTAATGAAAAAGGAGAACTCCATTTTAG
TCAAATTCATAAAGAAATTCCTACTCATATGAGCAGTTTAAACAGAACATTAAATGAATTGGTAAAATTGGGATTAATAT
CAAAAAGGAAAGAAGACAACAAACAGGCATTACCAAAAACATACTATAAATTAACACCATTAGGAAAAAAGGCACTATTA
TTATATGAAGTAGAAAAAATTATTGAAAATTCAAAAAATAATCAAAATATCATCATTCAAATTATTAATGGAAAAAATCA
TAATATCATCAACGCAAAAATTGTTAATATTCATAATAAATGA

Upstream 100 bases:

>100_bases
CTTTTCTCTTTTTTGTGAAATTTAGCAAAAATGTTAATTATCGTATAAATATGAAAATTCTCAAAAAAGCAAAAATAAAA
AATCATAAAAGGGCTAAATC

Downstream 100 bases:

>100_bases
TTGAAAATCTTAATATAATTTTTATTCTATTGGCTCAACTCTAACGTTGTCATAGTATGCTCTACCCCCTCCAATTCCTA
TTCCACCTTTAAGTATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL
LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK

Sequences:

>Translated_120_residues
MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL
LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK
>Mature_120_residues
MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL
LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0361

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y944_METJA (Q58354)

Other databases:

- EMBL:   L77117
- PIR:   H64417
- RefSeq:   NP_247939.1
- ProteinModelPortal:   Q58354
- SMR:   Q58354
- GeneID:   1451841
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0944
- NMPDR:   fig|243232.1.peg.976
- TIGR:   MJ0944
- HOGENOM:   HBG752497
- OMA:   WTEETEY
- ProtClustDB:   CLSK2749936
- BioCyc:   MJAN243232:MJ_0944-MONOMER
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR

EC number: NA

Molecular weight: Translated: 13863; Mature: 13863

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDN
CEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KQALPKTYYKLTPLGKKALLLYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK
HHCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDN
CEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KQALPKTYYKLTPLGKKALLLYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK
HHCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087