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The map label for this gene is 15668574

Identifier: 15668574

GI number: 15668574

Start: 359108

End: 359923

Strand: Direct

Name: 15668574

Synonym: MJ0398

Alternate gene names: NA

Gene position: 359108-359923 (Clockwise)

Preceding gene: 15668568

Following gene: 15668576

Centisome position: 21.57

GC content: 26.96

Gene sequence:

>816_bases
ATGGTTAATCTTAAAGAACTCTCCCAAAATGAAGTATTGGAACTTATAAATTATGTTAAATCATTAAGGAAGCAAAATTT
TAGCTATTCTCAAATATCTAAAAAGATTGAAATTGAAAGGAATATTAAAATTTCCAAATCTACGATTATTAGATGGTGTA
AAAATAGCAATAATCCATTCAATAAAACAAAATTTATAGATTTATCACCTTCTCCTGAGCTTTCTTATATAATAGGGGTT
TATTTTGGAGATGCTAACATTTATTACAGAAAAAAGACAGGAAGTTACTATTTTAGGATTAAGGTTGTTGATAAAGACTT
TGTAGATGTTGTTAAAAATAGTTTGATAAAAATTGGATTAAATCCAACAATTAGCTATGTGGAAGAGAAAACAAGAAGTA
ATAGGTGGCATGTTGAAGCGAGCAGTAAAAGTTTGTATAAATTTTTAAGTCAAAACAAAGAAGAACTTTTTAAAGTTGCT
GAAAAGTATCCTGAAGATTTTTTAAGAGGATTTTTTGATAGCGAAGGATATGTTACTTCAAATAAAATAGCATTAGAAAA
TTATGATTTAGAACTTTTGGAATTTTCAAAAGAGCTGTTAAAAAAGTTGGATGTACATTCAACAATCCACATAGCAAAGA
AAAAAGGAACTGAATCAAATATTAGAGGTGAAATTTACCATTATAAAGACGATTTTTATAGATTGTCAATCCATAGAAAA
GAATCTGTTAGGAACTTTGCTATAAAAGTCAGTTTCTCTATAAAAAGAAAACGAGAAAGACTCCAAAAACTCTTGGAATC
TATGGATAAACATTAA

Upstream 100 bases:

>100_bases
GTTATTTTATAAATAATGCTACAGTAAGACATGAAAATTGGAAACAGAATGATATGATGGATACTTTCTTAAATACTTAT
CTTATTATTTTGTTGATAAT

Downstream 100 bases:

>100_bases
TTCTTACATTTAAATATACAAATATAATATATCAAAATATAGAAATAGTAGCGGGGGGAGGATTTGAACCTCCGATCTCC
GGGTTATGAGCCCGGCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVNLKELSQNEVLELINYVKSLRKQNFSYSQISKKIEIERNIKISKSTIIRWCKNSNNPFNKTKFIDLSPSPELSYIIGV
YFGDANIYYRKKTGSYYFRIKVVDKDFVDVVKNSLIKIGLNPTISYVEEKTRSNRWHVEASSKSLYKFLSQNKEELFKVA
EKYPEDFLRGFFDSEGYVTSNKIALENYDLELLEFSKELLKKLDVHSTIHIAKKKGTESNIRGEIYHYKDDFYRLSIHRK
ESVRNFAIKVSFSIKRKRERLQKLLESMDKH

Sequences:

>Translated_271_residues
MVNLKELSQNEVLELINYVKSLRKQNFSYSQISKKIEIERNIKISKSTIIRWCKNSNNPFNKTKFIDLSPSPELSYIIGV
YFGDANIYYRKKTGSYYFRIKVVDKDFVDVVKNSLIKIGLNPTISYVEEKTRSNRWHVEASSKSLYKFLSQNKEELFKVA
EKYPEDFLRGFFDSEGYVTSNKIALENYDLELLEFSKELLKKLDVHSTIHIAKKKGTESNIRGEIYHYKDDFYRLSIHRK
ESVRNFAIKVSFSIKRKRERLQKLLESMDKH
>Mature_271_residues
MVNLKELSQNEVLELINYVKSLRKQNFSYSQISKKIEIERNIKISKSTIIRWCKNSNNPFNKTKFIDLSPSPELSYIIGV
YFGDANIYYRKKTGSYYFRIKVVDKDFVDVVKNSLIKIGLNPTISYVEEKTRSNRWHVEASSKSLYKFLSQNKEELFKVA
EKYPEDFLRGFFDSEGYVTSNKIALENYDLELLEFSKELLKKLDVHSTIHIAKKKGTESNIRGEIYHYKDDFYRLSIHRK
ESVRNFAIKVSFSIKRKRERLQKLLESMDKH

Specific function: Unknown

COG id: COG3780

COG function: function code L; DNA endonuclease related to intein-encoded endonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y398_METJA (Q57841)

Other databases:

- EMBL:   L77117
- PIR:   F64349
- RefSeq:   NP_247372.1
- ProteinModelPortal:   Q57841
- GeneID:   1451257
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0398
- NMPDR:   fig|243232.1.peg.409
- TIGR:   MJ0398
- HOGENOM:   HBG243576
- OMA:   FFDSEGY
- ProtClustDB:   CLSK397791
- BioCyc:   MJAN243232:MJ_0398-MONOMER
- InterPro:   IPR004042

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32120; Mature: 32120

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLKELSQNEVLELINYVKSLRKQNFSYSQISKKIEIERNIKISKSTIIRWCKNSNNPF
CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCEEHHHHHHHHHCCCCCCC
NKTKFIDLSPSPELSYIIGVYFGDANIYYRKKTGSYYFRIKVVDKDFVDVVKNSLIKIGL
CCEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEEEECHHHHHHHHHCEEEECC
NPTISYVEEKTRSNRWHVEASSKSLYKFLSQNKEELFKVAEKYPEDFLRGFFDSEGYVTS
CCHHHHHHHHHCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCCCEEEC
NKIALENYDLELLEFSKELLKKLDVHSTIHIAKKKGTESNIRGEIYHYKDDFYRLSIHRK
CEEEEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCEEEEEECCCEEEEEEEHH
ESVRNFAIKVSFSIKRKRERLQKLLESMDKH
HCCCEEEEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNLKELSQNEVLELINYVKSLRKQNFSYSQISKKIEIERNIKISKSTIIRWCKNSNNPF
CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCEEHHHHHHHHHCCCCCCC
NKTKFIDLSPSPELSYIIGVYFGDANIYYRKKTGSYYFRIKVVDKDFVDVVKNSLIKIGL
CCEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCEEEEEEEECHHHHHHHHHCEEEECC
NPTISYVEEKTRSNRWHVEASSKSLYKFLSQNKEELFKVAEKYPEDFLRGFFDSEGYVTS
CCHHHHHHHHHCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCCCEEEC
NKIALENYDLELLEFSKELLKKLDVHSTIHIAKKKGTESNIRGEIYHYKDDFYRLSIHRK
CEEEEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCEEEEEECCCEEEEEEEHH
ESVRNFAIKVSFSIKRKRERLQKLLESMDKH
HCCCEEEEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087