| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668568
Identifier: 15668568
GI number: 15668568
Start: 355786
End: 356805
Strand: Direct
Name: 15668568
Synonym: MJ0392
Alternate gene names: NA
Gene position: 355786-356805 (Clockwise)
Preceding gene: 15668565
Following gene: 15668574
Centisome position: 21.37
GC content: 31.08
Gene sequence:
>1020_bases ATGAATTACTCAATAAGATTATTCAAAATTATGGGGATTCCAATAGAGCTTCATATAACCTTTATTTTATTTTTAGTGGT CATAATTGGACTGTCTATAATGAATAATAGCATATTTTGGGCAGTTCTCTTTATCTTATTATTTGTGTCTGTTGTTTTAC ATGAGTTAGGTCATAGTTATGTAGCTAAGAAGTATGGGGTAAAGATAGAAAAAATTTTGCTATTGCCGATTGGTGGAGTG GCGATGATGGATAAAATCCCAAAAGAGGGGGAGTTAAGGATAGGGATAGCTGGGCCTTTAGTTAGCTTTATTATTGGAAT AGTTTTGTTAATTGTATCTCAATTTTTTGATATAAACATAAATGGATATCCTCTATTATATACTTTAAGCCTACTGAACT TAATGCTTGGAGGATTTAATTTAATTCCAGCATTTCCTATGGATGGCGGAAGAATATTGAGAGCTATATTGTCAAAAAAA TATGGTTATTTGAAATCAACGAAGATAGCAGCAAATATTGGAAAGAGCTTGGCTTTAATAATGCTCTTATTTGGTCTCTT ATCAATGAACATTATATTAATCTTGGTTAGTTTGTTTGTTTATTTTGGAGCTGAGCAAGAAAGTAGAGTGGTAGAAGTTG AGACAATATTTAAAAATATTAAGGCAAAGGACATTATGACGCCAAATCCAGTATATGTAACTCCAGATATGAGTATAGAG GAGTTCTTGGATTTTATGCTTAAACATAAGTATTTTGGATATCCTGTAGTTGAAAATGGGAAGTTAGTTGGCTGTATTGG AATAGGTAATATACATAAAAAAGAAGGAACTGTAAGGGATTATATGGAAAAGCCTGTTGTAGTTAGTGAAGATACTGATA TAAAAGAGATTCTAAGAAAAATGGCTAATACAGATAGAGTATTTGTTGTAGAAGGTGGAAAATTAAAAGGAATCATATCA AAAACAGATATCTTGAGGGCTATGAGTATATTGGAGTTAAAAGAAGAGCTAAAAGATTAA
Upstream 100 bases:
>100_bases CTGGAATCATATATTTCACCGAATCATAAATATGTTATGAAATAGTAATATATAGCAATAGGATTAAAAATGTAATTAAA ATAAAAATAGGGGGAGGGGT
Downstream 100 bases:
>100_bases CTTACTCCTTCTTTTGTGGTTGCTTCCATTCCATGTAGCCACATTTTCCACATGCGTATCTGTTTAAGTGCTCAGCCATG AAAACTCCAGGACCACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Site-2-type intermembrane protease
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNYSIRLFKIMGIPIELHITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSYVAKKYGVKIEKILLLPIGGV AMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKK YGYLKSTKIAANIGKSLALIMLLFGLLSMNIILILVSLFVYFGAEQESRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIE EFLDFMLKHKYFGYPVVENGKLVGCIGIGNIHKKEGTVRDYMEKPVVVSEDTDIKEILRKMANTDRVFVVEGGKLKGIIS KTDILRAMSILELKEELKD
Sequences:
>Translated_339_residues MNYSIRLFKIMGIPIELHITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSYVAKKYGVKIEKILLLPIGGV AMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKK YGYLKSTKIAANIGKSLALIMLLFGLLSMNIILILVSLFVYFGAEQESRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIE EFLDFMLKHKYFGYPVVENGKLVGCIGIGNIHKKEGTVRDYMEKPVVVSEDTDIKEILRKMANTDRVFVVEGGKLKGIIS KTDILRAMSILELKEELKD >Mature_339_residues MNYSIRLFKIMGIPIELHITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSYVAKKYGVKIEKILLLPIGGV AMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKK YGYLKSTKIAANIGKSLALIMLLFGLLSMNIILILVSLFVYFGAEQESRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIE EFLDFMLKHKYFGYPVVENGKLVGCIGIGNIHKKEGTVRDYMEKPVVVSEDTDIKEILRKMANTDRVFVVEGGKLKGIIS KTDILRAMSILELKEELKD
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y392_METJA (Q57837)
Other databases:
- EMBL: L77117 - PIR: H64348 - RefSeq: NP_247366.1 - PDB: 3B4R - PDBsum: 3B4R - ProteinModelPortal: Q57837 - SMR: Q57837 - MEROPS: M50.006 - GeneID: 1451249 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0392 - NMPDR: fig|243232.1.peg.403 - TIGR: MJ0392 - HOGENOM: HBG688956 - OMA: FGASQEY - ProtClustDB: CLSK876166 - BioCyc: MJAN243232:MJ_0392-MONOMER - GO: GO:0006508 - InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF006404 - SMART: SM00116
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50
EC number: NA
Molecular weight: Translated: 37966; Mature: 37966
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS51371 CBS; PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 55-55
Signals:
None
Transmembrane regions:
HASH(0x406d4ba4)-; HASH(0xc50bebc)-; HASH(0xcb0bb5c)-; HASH(0xcc680fc)-; HASH(0xc3814e8)-; HASH(0xcbefcb0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSIRLFKIMGIPIELHITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSY CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHH VAKKYGVKIEKILLLPIGGVAMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQFFDINI HHHHHCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCC NGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKKYGYLKSTKIAANIGKSLALI CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MLLFGLLSMNIILILVSLFVYFGAEQESRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCEEECCCCCHH EFLDFMLKHKYFGYPVVENGKLVGCIGIGNIHKKEGTVRDYMEKPVVVSEDTDIKEILRK HHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCCHHHHHHH MANTDRVFVVEGGKLKGIISKTDILRAMSILELKEELKD HCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MNYSIRLFKIMGIPIELHITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSY CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHH VAKKYGVKIEKILLLPIGGVAMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQFFDINI HHHHHCCEEEEEEEEECCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCC NGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRAILSKKYGYLKSTKIAANIGKSLALI CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MLLFGLLSMNIILILVSLFVYFGAEQESRVVEVETIFKNIKAKDIMTPNPVYVTPDMSIE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCEEECCCCCHH EFLDFMLKHKYFGYPVVENGKLVGCIGIGNIHKKEGTVRDYMEKPVVVSEDTDIKEILRK HHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCCHHHHHHH MANTDRVFVVEGGKLKGIISKTDILRAMSILELKEELKD HCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087