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The map label for this gene is ycbK [C]

Identifier: 16273553

GI number: 16273553

Start: 1734144

End: 1734527

Strand: Reverse

Name: ycbK [C]

Synonym: HI1666

Alternate gene names: 16273553

Gene position: 1734527-1734144 (Counterclockwise)

Preceding gene: 16273554

Following gene: 16273552

Centisome position: 94.78

GC content: 35.42

Gene sequence:

>384_bases
ATGAATTATGTGGATCAGAATAAACGAAAATGGTTATCGCTGGGCGGTATTGCGTTAGGAATATCTATTTTACCAAATTC
TGTATTAGCAATGGTTTCAACACCTAAACCTCGTATTTTAACTTTCCGCAACATTAATACGGGCGAAAGATTAAGTGGCG
AGTTTTCTTTAGCAAAAGGTTTTTCGCCTGCGATGTTAAAAAAATTGGATTATTTAATGCGTGATAAAAGGACAAATCAA
GTGCATAAAATGGATCCAAATTTATTCCAGAAATTTTATAATATCCAAACTAATTTAGGCTTACGCAATGCTGAAATTGA
AGTAATTTGTGGTTATCGTTCAGCCTCTACTAATGCAATGCGTCGTCGCCAAAGTCGTGCGTAG

Upstream 100 bases:

>100_bases
AAATTTACCTGATATTTATGGTTATGATCGTCAGATTAATCTTGCTGAGATTAATTGGGATCTCGTAAAAAAATATCTTC
AATAAAATAAGGGAGCTATA

Downstream 100 bases:

>100_bases
CGAAAAATAGTTATCACATTAAAGGAAAAGCCATTGATTTTCGTATTGCGGGTGTGCCTTTGATTAAAGTGAAATCTTCT
GCGGAAAGTCTGCGAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSRA

Sequences:

>Translated_127_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSRA
>Mature_127_residues
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMRDKRTNQ
VHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAMRRRQSRA

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycbK

Homologues:

Organism=Escherichia coli, GI1787157, Length=127, Percent_Identity=44.8818897637795, Blast_Score=116, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1666_HAEIN (P44284)

Other databases:

- EMBL:   L42023
- PIR:   F64039
- RefSeq:   NP_439808.1
- GeneID:   950486
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1666
- NMPDR:   fig|71421.1.peg.1580
- TIGR:   HI_1666
- HOGENOM:   HBG613277
- OMA:   NINTGEF
- BioCyc:   HINF71421:HI_1666-MONOMER
- InterPro:   IPR010275
- InterPro:   IPR009045
- Gene3D:   G3DSA:3.30.1380.10

Pfam domain/function: PF05951 Peptidase_M15_2; SSF55166 Hedgehog_sig_N

EC number: NA

Molecular weight: Translated: 14494; Mature: 14494

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe37d6fc)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKG
CCCCCCCCHHHHHHCCHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCCCCCCCCHHCCC
FSPAMLKKLDYLMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAM
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
RRRQSRA
HHHHCCH
>Mature Secondary Structure
MNYVDQNKRKWLSLGGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKG
CCCCCCCCHHHHHHCCHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCCCCCCCCHHCCC
FSPAMLKKLDYLMRDKRTNQVHKMDPNLFQKFYNIQTNLGLRNAEIEVICGYRSASTNAM
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
RRRQSRA
HHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800